Silicimonas algicola: EF888_21265
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Entry
EF888_21265 CDS
T05779
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salo
Silicimonas algicola
Pathway
salo03030
DNA replication
salo03430
Mismatch repair
salo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EF888_21265
03430 Mismatch repair
EF888_21265
03440 Homologous recombination
EF888_21265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salo03032
]
EF888_21265
03400 DNA repair and recombination proteins [BR:
salo03400
]
EF888_21265
Enzymes [BR:
salo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EF888_21265
DNA replication proteins [BR:
salo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EF888_21265
DNA repair and recombination proteins [BR:
salo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EF888_21265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZQ69819
LinkDB
All DBs
Position
4286513..4287214
Genome browser
AA seq
233 aa
AA seq
DB search
MREIVLDTETTGLDPETGDRIVEIGAVELHGHVPTGRTFHQYLNPERMVPKEAIDVHGLT
DDFLRDKPLFRHVAKEFLDFIGDAKLVIHNAAFDMKFLNAELRWLGLPQIPWERAVDTLD
IARRKFPGSPASLDALCRRYSIDNSARTLHGALLDSEILADVYLELIGGRQPDLVLAPVD
QKRTGSDVTEAWRPQPRPRPLPARLTEAEVAAHEAFVGKMGSGALWLTFSSPA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgttctcgacaccgaaaccaccggactggatcccgagactggcgaccgc
attgtcgaaatcggcgcggtcgaactgcatgggcacgtcccgacgggacggacctttcac
cagtacctcaaccccgagcgcatggttccaaaagaagccatagacgtccatggcctgaca
gacgacttcctgcgcgacaaacctctgttccgccatgtcgcgaaggagtttctagacttc
atcggtgacgcgaagcttgtgatccacaacgccgcgttcgacatgaaattcctgaacgcc
gaattgcgctggctcgggcttccccagatcccgtgggagcgcgccgtcgacaccctggac
atcgctcggcggaagtttcccggttcgccggcatcgctggacgcactttgccgccgctac
tccatcgacaactcggcaagaacgctgcacggcgctcttctcgacagcgagattctggca
gacgtttatcttgaactgatcggcgggcgtcagccggaccttgtcctagccccagtcgac
cagaagcggacgggaagcgatgtgacagaagcgtggcgtccccagccgcgcccccgtccc
cttcccgcccggctgaccgaggccgaggtagcggcacacgaggcattcgtcgggaagatg
gggagtggggcgctttggctgacgttcagttcgccggcgtag
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