Salvelinus sp. IW2-2015 (Arctic char): 111949391
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Entry
111949391 CDS
T05762
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111949391
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111949391
04090 CD molecules [BR:
salp04090
]
111949391
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
ALCAM
111949391
CD molecules [BR:
salp04090
]
Proteins
111949391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Syndecan
DUF6773
DUF6377
Motif
Other DBs
NCBI-GeneID:
111949391
NCBI-ProteinID:
XP_023822283
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Position
LG22:26590308..26665886
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AA seq
560 aa
AA seq
DB search
MHFSSCLCTLLVALVYQVSAMDTVIGLYGETVEVPCNNGAPKPKDLFITKWKYDNGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAASLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALAAELEIGKPTQLGQCSAPDANPAANITWFKNKKHLVADGKGIIISSKVK
VDEVTGLTTTSSTLQYTAEKGDTDALFTCGALNALSSPVSFTVTYPTERVSLHVISKGPL
MEGDNVTLKCKADGNPLPTSFNFHIQRKVVKVENSDSYTVTDVTRDSTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVMKSTGESLALNLQTDASGELRVSWTKDNGKLDKIPKFD
KLTYSDSGKYEVVVTMGALIKKASFELVVEGIPVIRRLAKQRGEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKISHKLTIVPTVNLTVVCTVSNELGQDTRAINVSTLFEEV
RMDKQGSSDDSDTTKLVVGVIVGLLLATVVVGLAYWLYLKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttccagctgtctgtgtaccctcctcgtcgcgcttgtctaccaagtgagcgct
atggatactgttatcggcctgtatggagagaccgttgaggtgccatgcaacaatggagcc
cccaaaccaaaggacctgttcataacaaaatggaaatacgacaatggagacctgctgacc
cagctgaaagaccaggatgcctctgtcatagcaaccgacaagtacaaagaccgtgtcagc
atggccgaaaactccagcctgctgattgctgcagcatcactgaaggacgagaagactttc
acctgcatggtggtggctggggctgacatctcagaataccctgtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccgcagagctggagattggcaaacca
acccagctagggcagtgcagcgcccctgatgccaacccagctgccaacatcacatggttc
aagaacaagaaacatctggtggcggatgggaaaggcattataatcagttccaaagtgaag
gtggacgaagtcactggcctcaccaccacttcctccactcttcagtacacagctgagaag
ggagacacagatgctctgttcacctgtggggccctgaacgcattgtcctccccagtctcc
ttcactgtcacctaccccacagagagggtcagtctacatgtcatttctaaagggcccctt
atggaaggagacaacgtgactctgaagtgcaaggcygacgggaacccacttcccaccagc
ttcaacttccacattcagagaaaggtggtgaaggtggagaactctgactcctacactgtg
actgatgtcacacgtgacagcacaggggaatacaagtgttctatcattgacaatgccaag
atggaagactccaagaacattaccatcaattacctggatatgagtttgagcccctctggg
aaggtcatgaagagcaccggcgaaagcttggctctgaacctgcagaccgatgcgtctgga
gaactcagggtgtcctggactaaggacaatggcaaactagacaaaatccctaagtttgac
aagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggcgctctcatc
aagaaagcctctttcgagctggtcgttgaaggtattccagtcatccggcggttggccaag
cagcgtggcgaggacggccagcacaaggtactgacctgcgaggctgagggctcccccaaa
cccactgtggcctggagcgtcaacggcacctcggctgatgaaagtccctacgtcaatggg
aagatctcacacaagctgaccattgtgcctacagtcaacctgaccgttgtctgcactgtg
tccaatgagcttggccaggacaccagggctattaacgtgtcgaccttatttgaggaggtg
agaatggataaacaaggctcatcagatgacagtgacacaacaaagttggtggtgggagtt
attgttggtctgctcctggccactgtagttgtgggtctagcatactggctgtacctgaag
aaatccaagcaaggcagctggaagactggtgagaaggaggatggatccactgaggagagc
aagaaactggaggagaaaatagaggagaagctggaggaaaacagccagaaagttgaggtg
taa
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