Salvelinus sp. IW2-2015 (Arctic char): 111949448
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Entry
111949448 CDS
T05762
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111949448
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111949448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_19
TPR_11
TPR_16
TPR_12
TPR_9
TPR_17
ARM_TT21_4th
ANAPC3
TPR_7
TPR_10
Motif
Other DBs
NCBI-GeneID:
111949448
NCBI-ProteinID:
XP_023822420
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All DBs
Position
LG3:5525116..5538094
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AA seq
667 aa
AA seq
DB search
MVGMSENKAIELQLQMRQNAEDLHNFMKDLDSWETDIKKKDEQLRSGSVGESQKSLPPVR
NKDYKKKREKKKASDNNAKTEPKQAPRIKSYDYQSWDKFDVDKALESMDKEDSAAESNDS
ESEDSGVPATDQDKALAEKEKGNQLFKEGKYDDAIECYTRGMGADPYNPVLPTNRAACFF
RLKKFAVAESDCNLSIALDSNYFKAFAXRGAARFAQQNYESALEDYVMVLKLDPGNLEAQ
NEVMKCKEVIAKLGGKAESPEAAVVTPPVVDVKQQQLMEEQQRRQEAVVQKDRGNAYFKE
GKYEAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALBGTYSKAFAR
RGTARAALGLLKQAKEDFEEVLKLEPGNKQAFHEMKKIAIDMGTSGLLATEEHAQRRTVL
PVNKPPHLQSTKPLRRVDIEEVGGKILVQKEPSAVFTSTTAPCVRPQKTTSIADTVREGQ
GEASPPSTSPSAKILKIEEISNIPSHSPVKGPEGGAVRAQTQKHREATVSEPTEPPATPS
TEVVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQILRTL
QSFYIKNEEPPVILEILRNLAGVRRFDMAVMFMSIPEKKVLQELFDFLRQAGLEDASVGA
LRKKYGV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcatgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaatgca
gaggacctgcataatttcatgaaagatcttgacagctgggaaactgacataaagaagaag
gatgagcaactaagaagtgggagcgttggcgagtctcaaaaaagcctcccaccagtgcga
aacaaggactacaaaaagaagagggagaaaaagaaggcatcagacaacaatgcaaagact
gaaccaaaacaagcacccaggataaagtcttatgactatcagtcatgggacaaatttgat
gtggacaaggctttggagtccatggataaagaggacagcgctgctgagtccaatgactct
gaatctgaggattctggggttcctgctactgaccaagacaaagctcttgctgagaaggag
aaaggtaatcagctgtttaaagaagggaagtatgatgatgccattgagtgttacaccaga
ggcatgggtgcagacccttataaccccgttctgcctacaaaccgagctgcctgcttcttc
agactcaaaaagtttgctgttgccgagtctgactgcaacttgtccatcgctttggacagt
aactacttcaaagcatttgcacraagaggcgcggctcgattcgcccagcaaaattatgaa
tctgccctagaagattatgtaatggtgctcaagctggatcctgggaacctggaagcacag
aatgaagtgatgaaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagccca
gaggctgcagtggtgacgccacctgtggtggacgtcaagcaacagcagctcatggaggaa
cagcagaggagacaggaggcggtggtgcagaaagacagggggaacgcatacttcaaagag
gggaagtatgaggctgcagtagagtactacaccaagggcatggaagcggacagcaccaat
gtcctccttcctgccaaccgggccatggcttacttaaagctgcagagatataaagaggct
gaggaggactgcagtaaagccatagccctgratggcacctactcaaaggcctttgcccgc
agaggtacagctagggctgctctgggactgctaaaacaagctaaagaagattttgaggag
gtcctgaarctagaaccaggaaacaagcaggcatttcatgagatgaagaagattgcaatt
gacatgggcaccagtggtctgctggcaacagaggagcatgcacagcggagaacagtactg
ccagttaacaaaccacctcatctgcagtcaaccaaaccattgaggagagtggacattgag
gaggttggtggaaagatccttgtccagaaggagccctcggctgtgttcacttcaaccaca
gccccctgtgttaggccccagaagaccacctccatcgcagacactgtgagagagggtcag
ggtgaggcctcacctccctctacctcccccagcgctaagatcctgaagattgaagaaata
tcaaacatcccctcacattcccctgtcaaagggcccgaggggggtgctgtgagagcacag
acacagaagcacagggaggcaactgtcagtgaaccaacagaaccgcctgctacaccctca
actgaggtcgtacctcctgcccccaccaacagcttccagctagaggcagacctaaggaag
attggaaatggccctgaagttatctacaagtatttgaagcaaatccagcctcaggcgtac
gcaaagatcttccagagctctcttgagccagacatgctcaatcagattctgaggacgtta
caaagcttctacatcaagaatgaagagccacctgtcatactggagatcctcaggaatctg
gccggtgtgaggcggttcgacatggctgtcatgttcatgtccatccctgagaagaaagtt
ctacaagaattgtttgactttcttcgtcaagctggacttgaggacgcttcagtaggagcc
ctgcgaaagaagtatggagtgtga
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