Salvelinus sp. IW2-2015 (Arctic char): 111949458
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Entry
111949458 CDS
T05762
Name
(RefSeq) synaptogenesis protein syg-2-like isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111949458
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111949458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111949458
04090 CD molecules [BR:
salp04090
]
111949458
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111949458
CD molecules [BR:
salp04090
]
Proteins
111949458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
Ig_3
V-set
I-set
Ig_2
C1-set
MINT_RID
Motif
Other DBs
NCBI-GeneID:
111949458
NCBI-ProteinID:
XP_023822431
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All DBs
Position
LG22:complement(23316793..23417251)
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AA seq
855 aa
AA seq
DB search
MAKRLLLDYHKSLPLNGLQASTVLLLIYGFTCVCSNEVLVPERVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFLNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASTTVNILVEPKVYVSAGSTALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTSTTQVRYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQDNVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFTFTRPLERNDSGLYRCEVSNDIGPRGQDVHVWIQDMEEDMEIDRNVTGILGEDVFLR
CQYLGQNDITDASWKRPDSRMKRSMKKLTGYKNNKTFSKDPDFSAPASPTNLTVKMRVST
LEAQGEYTCVFATDEEEITNSMFLTVLARPDIYTVVTEDTDNATHYQSVTCSATNGKPMA
LIRWEINGSPPTNDSSVGMRNTSYTNGTATMTSFLRFPTHLQDQDRVTCVVQHPTLPDPT
THVTVRVETFESPVMHVFVVRQRESPLWLAVCEYRGGRFGAHLSWVLPDNATGHISFRSG
YEGVRVLTNLTYEFSLALHEGQDLICLIQNRHGLKERRTVHVPKYYISSVRVLNQTTPLY
KPYGDEFVIHRMSLKENFHNQRILLKVYGSVPTYSLTCQRNDGTLVQMDGRALLFQSEVT
EREAGLYTCQASFYHHQASVLIQVEVTSEDKQLSECTLTLSCISETTILIVFIVCLSSAA
AITILLVTLCVFCKINGDCLASKKLESLAPLTSLTQELCSPELRKGKTVTVPGGGGQEYN
QLLSDSIVIDARSTV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctactcgattatcacaagagtctgccgctcaatggactgcaagct
tctacagttttgcttctcatatatgggtttacctgtgtgtgcagtaacgaggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgttttcaacccccagtttggcatctccatctctccagactacgccaggcgc
ctgtccttcctgaacccctccgtgcacgatgccaccatcgtcctggaaggcgtgggattt
caggacatcgggtcttacacgtgtaaagtggcgactttcccactgggcaacacgcaggca
tccaccaccgtcaatatactagtggagcccaaggtctacgtctccgccggctctacggcc
ctggtggatggtggtaatgaatcggtggcggccacctgcatagcagagcgcggccgacct
gcagccgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctccaccacgcaggtgcgctacgtgttggagccacggagacactcc
cagggccacacgctcacctgcgtggtgcgccacccagccctgcagactgagttcaggata
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtgggatatgaccagaac
tggtttgttggtcaggacaatgtgaagctggactgtggagccaaagccaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttactttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtccaatgacatcggtccacgcggtcaggacgttcatgtttggatacaagatatggag
gaggacatggagattgaccgtaacgtcactgggatccttggagaggatgtcttcctccgc
tgtcagtacctgggacagaatgacatcacagacgcctcatggaaacgcccagactctaga
atgaaacgatcgatgaagaaattaacaggctacaagaacaacaagactttcagcaaagac
ccagacttctccgccccagcctctcccactaatctgactgtgaagatgagggtgtctact
ctggaggcccagggggagtacacatgtgtattcgccaccgatgaagaggagatcactaac
agcatgtttctcactgttctggctcgacctgatatctacacagtggtgacagaggacaca
gacaacgctacccactaccagtcagtcacatgctcagctaccaatggtaaacctatggct
ctgattcgctgggagatcaacggcagccctcctactaacgattcctctgtggggatgagg
aacaccagttataccaatggcactgccactatgaccagcttccttcgcttccccacccac
ctacaggatcaggacagggtgacctgtgtggtccagcacccaaccctgcctgaccccacc
acacatgtcacagtgagagtggagaccttcgagtcccctgtgatgcatgtttttgttgtg
aggcagagggaatctcctctgtggctggctgtatgcgagtacagagggggcaggttcgga
gcacacctctcttgggttctacctgacaacgccacaggccacatctccttccgctctggg
tatgaaggagtgagagtgctaaccaacctcacctatgagttctcactggccctccacgag
ggtcaggacctgatctgcctcattcaaaatcgccatggactaaaggagaggaggacagtc
catgtccccaaatactacatctcatctgtcagagtactgaatcaaaccactccactgtac
aaaccttatggagacgagttcgttatacatcgaatgtccctaaaggagaatttccacaac
cagaggatcctgctcaaagtctatggcagtgtgccaacttacagccttacctgtcagaga
aatgacggcacattggtccagatggatggtcgtgctctgttgttccaatcagaggtcacg
gagcgggaggcgggcctctacacttgccaagcctctttctaccaccatcaggcctcggtc
ctcattcaagtggaggtcaccagtgaagataaacagctcagtgagtgtacactcacctta
tcatgcatcagtgaaacaacaatattgattgtcttcatcgtctgtctctcctcggctgca
gccatcacgatcctccttgtcactctgtgtgttttctgcaaaataaatggagactgccta
gcatctaagaagctggagtcgctggcacccttgacctctctgacccaggaactgtgctct
ccagagctgaggaagggaaagacagtgacagtaccaggagggggaggccaggagtacaac
cagctgctcagcgactctattgtcattgatgccagatccactgtgtaa
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