Salvelinus sp. IW2-2015 (Arctic char): 111949520
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Entry
111949520 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111949520
04131 Membrane trafficking [BR:
salp04131
]
111949520
04121 Ubiquitin system [BR:
salp04121
]
111949520
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111949520
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
111949520
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111949520
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111949520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
P53_TAD
AraC_N
DZR
Motif
Other DBs
NCBI-GeneID:
111949520
NCBI-ProteinID:
XP_023822539
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All DBs
Position
LG3:complement(5704543..5708520)
Genome browser
AA seq
487 aa
AA seq
DB search
MDQSDNDLQGTDGSGSLGGPDVRRRIPIKLISKPTIRSKPAPRTQRPMGRQPSKPQAGDE
ESFSFKQEERFDCGTKAGDVFASQRRFPQQMFWDFKLNLIGEKDDIPAHFCDKCGLPIRI
YGRMIPCKHVFCYECALLHEKKGDKMCPGMQLFSCTDPVQRIEQCLRGSLYMCSIVQGCK
RTYLSQRDLQAHINHRHMRAAKALASRQEALHLPPSTEVPDRFRVPPPHLPKTQGHLPPS
LQHGGHDPYGQPPPASHDAPPLSQETFRIATVTTRARSNLITVPIQDDSGSSSTSSSRDP
LPPGPGPAPPPHHHPGDYPGQPVVSHPHHMMAPPQQHYGPPPPPPPPINHPMQHPPQGSG
TPHMVYNQAGPPPPMSNAPPPITPPPGHIMGQMPPYMNHPPPGPPPQHGGPPVNAPPPHH
YNPNPMQQFPEDQGTLSPPFNQQGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQS
RYRPYYQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagtgacaatgacctgcaaggtacggacggctcggggagtcttgggggccct
gatgtccgcagacgcatccccatcaaactcatctccaaaccaaccatcaggagcaaacct
gctccccggacacaaagacccatgggcaggcagccctccaaaccccaggctggggatgaa
gagagttttagcttcaagcaagaggagaggttcgactgtggtaccaaggctggggatgtg
tttgcaagtcaacggaggttcccccagcaaatgttttgggactttaagttgaatttgata
ggtgaaaaggatgacattccagcacacttttgtgacaagtgtggtctgcccataaggatc
tatggacgcatgattccatgcaagcatgtgttctgttatgagtgtgctttgctccacgag
aagaagggagacaagatgtgcccaggtatgcagctcttcagctgcacagacccggtccag
cgcatcgaacagtgtctgcggggctccctctacatgtgcagcatcgtgcaaggctgcaag
cgcacctacctttcccagcgtgacctgcaggcccacatcaaccaccgccacatgagggca
gccaaggccttggcaagccgccaggargccctgcaccttcccccatccacagaggtgcct
gaccgcttccgtgtgcccccgcctcacctgcccaagacccaagggcatctcccgccctcc
ctccaacacgggggtcatgacccctacggtcagccaccaccggcttcccatgatgcacct
cctctttcccaggagaccttccgcatcgccacggtaactacacgcgcacgcagcaacctc
atcaccgtgccaatccaggatgactccggttcttcctccacctcttcctcccgtgaccct
ctccctcctggcccgggccctgctccacccccacaccaccaccctggggactaccctggt
cagcctgtagtgtcccacccacaccacatgatggcaccaccgcaacagcactacggccct
ccacctcctccccctccacccatcaaccaccccatgcagcacccaccccagggctctggg
acaccccacatggtgtacaaccaggccggccctcccccgcctatgtccaacgcaccccct
cccattacacccccgccaggacacatcatgggtcagatgccrccctacatgaaccaccct
cctccaggccccccacctcaacacggtggtcctccagtcaacgccccccctccccaccac
tacaaccctaaccccatgcagcagttccctgaggaccagggcacacttagtccccctttt
aaccagcaagggggtctgagccctgggatgtggcctgcccctagagggcctcctcctcca
aggatgcagggcccccctcctcagggccagatgcctggaccccatcaccccgatcagtcc
cgctaccgcccttattatcagtaa
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