Salvelinus sp. IW2-2015 (Arctic char): 111949525
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Entry
111949525 CDS
T05762
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111949525
Proteoglycans [BR:
salp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
111949525
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_LRWD1
LRR_14
LRR_EndoS
LRR_RPS2
LRR_9
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111949525
NCBI-ProteinID:
XP_023822548
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Position
LG22:complement(29417459..29428221)
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AA seq
354 aa
AA seq
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MVKSMMAFPLCVSLWLLLAVHGQAGAVKNCHPSCHCEVESFGLFDSFSLTRVDCRGVGTX
PIPIPLDTAHLDLSSNSMSLLTDNMLSGPGYTTLVSLDLSNNRISMVSPKALSRLRYLES
LDLSHNFLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFITKGHGEPINVDLSHNQLTVV
SRSSSRSPLLHVQSLTLAANQLRAVPKLKGIPLRDLSLDGNIILRIEEGAFEDLKDLVHL
SLSALPELSDIQPNSFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVTSL
PNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEVLTCDVKGIVS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagagcatgatggcgttccccctgtgtgttagtctgtggctgctcctggctgtc
catggccaggctggagctgtgaagaactgccacccaagctgccactgtgaggtggagagc
ttcggcctgttcgacagcttcagcctgaccagggtggactgcaggggagtgggcaccagk
cccatccccatccccctggacacggcccacctggacctgtcctccaactccatgtccctg
ctgaccgacaacatgctctctggacctggctataccaccttggtcagcctggacctcagc
aacaaccgcatttccatggtcagccccaaggccctgtccaggctgcgctacctggagtct
ctggacctcagccacaacttcctggagggcctggatgagggctgcttctctggcctccct
ctggccgaggtggacctcagccacaaccacttccgggagtttgacctcgatatgttcatc
actaaaggtcacggagagccaatcaacgtggatctgtcccacaaccagctgacggtggtc
tccaggagttcctctaggagccccttactacatgtccagagcctgactctagcagccaat
cagctgagggccgtgcccaagctaaaaggcatcccgttgagggacctaagcctggatggg
aacattatcttgcgcattgaggagggggcctttgaggacctcaaggacctggttcaccta
tccctcagtgcgcttcctgagctctctgacatccagcctaacagtttcagaggccttcag
aaccttcaggtcttggacctgtccaacaatgccaagctaaagacactgagcccagctgtg
ttcagtggacttgtgtctctacaggagctcaatctgtccaactctggtgtaacgtcattg
ccaaataacatgctaagtcacttgccaagcatcaagagtattaccctgggccagaatatc
cattgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaacagaaa
catgacgaggtgctaacctgtgacgttaaaggcattgtgtcgtga
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