Salvelinus sp. IW2-2015 (Arctic char): 111949557
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Entry
111949557 CDS
T05762
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111949557
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
111949557
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111949557
NCBI-ProteinID:
XP_023822610
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Position
LG3:5864404..5875880
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AA seq
764 aa
AA seq
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MSLLSPKKLRCYFPHLFNLIEKTGNTVATMLGTSTSTEQGASENLIVLEICRISPLKFED
TPVLISSVAPDTVEESIKAKKKKTKALSEQGPKEPAIEHNQKDGHQLTVEKRGKEPKHKE
RTVTELEVVEKERKKLKKGNEEKQQHVIKDEMEVPDPEEQTGENTKKKSKNLQTQQGRAD
LVIADENNMNSRKKKRKHNDIEPEWVIDSVLSKAAVDVSAVTAPDEARKSKKKHKNRQTE
LEEGAESCWTVSRTADDPETIELHPEMVKRGKNVVTETEENVKKRKRNNKKHRECELNDC
PDKADCPGLKEQTERKLKPKRPKTYGESAAVEGSGRKKNHSRESDKGMDSVHSAEGVLDL
TVPNDNRTHDAGTNGETEGAHSVMVETGTQHNKPSLKEETQCVDEWQALNDLKEFIPNVE
SKSVDEIHKMIKYDLDRFKEFRRQGLSLRSGRFNTQENDRLMSNVYDFLALTGIQSGSKL
FHPQRFKGEEANIKKLKCQHRFHERIGEGIPRPWHHVYIRGRKIFDGSNYKGRFTEEELH
TLKKLQTLHGNKWAKISTLTGRSESALEKRFAQMSANKGAWTKEELKRLMEAVRKHLVGQ
AEPGSGPATIRKDKLYNNIPWTDVCQTVETRHSSQCRIKWLGVLKHILAYGQPVFSGGTK
SLQGKVDLIKALNAMQVEDVAGIDWEEIAQTIGDVTPRYLQTQYYRLKVDNVPLWQSMSF
CEIIDFLNSRVLPNFEERLKVLIKSGYVVSRNDPQELFLLSEIF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgtcaccaaagaagttacggtgttactttccccatttgttcaacctgatc
gagaaaacaggtaatactgtagccaccatgctggggacttcaacgtccactgaacagggg
gctagtgagaatctcatagtgcttgagatatgtcgaatatcccctcttaaatttgaagac
actcctgtattaatctcatcagtggcccctgatacagtcgaggaatccataaaagccaaa
aagaaaaagactaaagcactatctgaacagggaccaaaagaaccggcaattgagcataat
caaaaggatggtcaccagttgacagtcgagaaaagaggtaaagaacctaaacataaagag
cgaacagtgaccgagctggaagtggtggagaaagagaggaagaaacttaaaaaaggaaac
gaagagaagcagcaacatgttattaaagatgaaatggaggtaccagatcctgaggaacaa
actggagagaatacaaagaaaaagtcaaagaatcttcaaacacaacaggggcgagcggat
ttagtgattgctgatgagaataatatgaatagccggaagaaaaagagaaaacataatgac
attgagccagaatgggtgatagacagtgtcctctcaaaggctgcagtagatgtttcagct
gtaactgcgccagatgaggccagaaagagtaagaagaagcacaagaacagacaaacagaa
cttgaggagggagcggagagctgttggacagtttcaagaacagcagatgatccagaaacc
atagaactgcaccctgaaatggtcaagagaggtaaaaatgtggtaactgagacagaggag
aatgtaaaaaaaaggaaacgaaataacaaaaaacacagagagtgtgaactgaacgattgt
ccagataaagcagactgtccaggtttaaaagaacaaactgaaagaaaattgaagccaaag
aggccaaaaacgtatggagagtctgcagctgtggagggcagcgggagaaagaaaaaccac
agcagagagtcagacaagggaatggacagtgtccactctgcagaaggtgttttggattta
actgttccaaatgacaacaggactcatgatgctggaacaaacggtgagacagagggcgcc
cattcagtcatggttgagacagggacccaacacaacaaacccagcctaaaggaagaaact
caatgtgtggacgagtggcaggctctgaatgatctcaaagagttcattcccaatgttgag
tcaaagtcggtcgacgagatccataagatgataaagtatgatcttgatcgattcaaggaa
ttccgaagacaaggcctttccctgcgaagtggaagattcaatacgcaggagaacgaccga
ctcatgagtaacgtctacgacttcctggctctcactgggattcagagtggctctaagctc
ttccatccacagcgcttcaaaggggaagaagcaaatatcaagaagttgaagtgtcagcac
agattccatgaaagaataggtgaaggaatacccaggccttggcatcacgtctatatacgt
gggaggaaaatatttgatggcagcaactacaagggcaggttcaccgaagaagaacttcac
actttgaaaaaactgcagacgttgcacggcaacaagtgggcgaagatctcgacgttgact
ggccgaagcgaatcggccctagagaaacgttttgctcaaatgtccgcaaacaaaggtgcg
tggaccaaggaagaactgaaaagactaatggaagctgtgcggaagcacctggtgggacag
gcagagcctggcagtggaccggccaccatcaggaaagacaaactgtacaacaacatcccc
tggacagatgtgtgccagacggttgaaacgcgccactcgtcccagtgtcgaataaaatgg
ttgggtgttttgaagcacatactggcatatggacaaccagtattcagtggaggcacgaaa
tcattacagggcaaagtggatttgatcaaagccttgaatgcaatgcaggtggaagatgtt
gcaggtatcgactgggaagaaattgctcagacaattggggatgttacgccgcgctatcta
cagacacagtactacaggctaaaggtagacaacgttccgttgtggcagagcatgtccttc
tgtgagatcattgacttcctcaacagtagagttctccccaattttgaagagcgcctcaaa
gttctgataaaatcaggatatgtggtgtccagaaatgatcctcaagagctcttcctactc
tctgagatcttttga
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