Salvelinus sp. IW2-2015 (Arctic char): 111949607
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Entry
111949607 CDS
T05762
Name
(RefSeq) RILP-like protein 1
KO
K13883
Rab-interacting lysosomal protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagocytosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
111949607
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111949607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111949607
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111949607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH1
RILP
ATG16
RecE_M
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
111949607
NCBI-ProteinID:
XP_023822692
LinkDB
All DBs
Position
LG22:21182736..21200148
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AA seq
441 aa
AA seq
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MHACAIMEKDCGRDDQKQDVKTEVCFERTCSALTVDDVYEIAKLIGSEVETLIDGYGKES
ATGLVPKIVKVLELLESFASRNHAHKSKEEDLLKAFETLNVQKQKKTRNVKECEESKNEI
QREVQEEVEKQKRRCEELQAQVLHLQMENQELQSCLRGNHVQEDRVQRQEREVMLKLKEV
VDKQRDELRAKAQQIASVSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVERKADM
EADLREKQKEIERLTTQLEKANAAAGTANPCKTEVDLTDKLVIDLKDPNRPCFTKQEVRE
MLTERNELKANLFLVQEELSYYQREILNDERCPGFLLDAVRSAIKKQKTVIKAKMLGMPE
DECSSDEEKGPLFERRADTETETDSTDSKPQESRIRNLFGFLTRSGSNHSSRSPSENNAA
SSWEIIDDTDNTAETEXRQSP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttgtgcaataatggagaaggattgcggtagagacgatcaaaagcaagacgtc
aagacagaggtgtgttttgaaaggacatgttcagcactaactgtggatgatgtatacgaa
atagctaaattgattggctcggaagtggaaacacttattgacggctacggtaaagagagc
gccacaggactggtgcctaaaattgtcaaagttctagaacttttggagagcttcgcatcg
cggaaccatgcacacaagtcaaaagaagaagacttacttaaagcgttcgaaacacttaat
gtacagaaacagaagaagacgagaaatgtgaaagaatgcgaagaaagcaagaacgaaata
caacgggaggtgcaggaggaggtggagaagcagaagaggaggtgcgaggagctgcaggcc
caggtattgcatctacagatggagaatcaggagttacagagctgcctgaggggcaaccat
gtccaggaagaccgtgtccaacggcaggagcgggaggtgatgctgaaactgaaggaggtg
gttgacaagcagagagatgagttgagggccaaagcacagcagatagccagcgtgtctaaa
gaggtggaggcgctgcaggagcagttggagcgcttcatgaagatgaatggggagctgaga
cacaagcagagcatcgttacggcccaggtgaagaatgctgtggagaggaaggctgacatg
gaggcagacctccgagagaaacagaaagagatagaacgcctcaccacccagctggaaaag
gccaacgctgctgctggcacggccaatccgtgtaagacagaagtggacctgactgacaag
ctggtgatagacctgaaagatcccaacagaccctgtttcaccaagcaggaggtcagagag
atgctgacagagaggaacgagctcaaagccaacctgttcctggtgcaggaggaactctcc
tactaccagagggagatcctgaatgatgagcggtgtccaggattcttgctggacgctgta
cgttctgcaataaagaaacagaaaactgtcatcaaggccaagatgttgggcatgccagag
gacgaatgcagcagtgatgaggagaaaggacccctgtttgagaggagagcagacacagaa
accgagacagatagcactgacagcaaaccacaagagtctcgcatcaggaacctctttggc
ttcctgacgcgctccggcagcaaccacagcagccgtagtcccagtgaaaacaacgctgct
tcttcctgggaaatcatcgacgacactgacaacactgcggagacagaaycccgacaatca
ccataa
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