Salvelinus sp. IW2-2015 (Arctic char): 111949719
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Entry
111949719 CDS
T05762
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111949719
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111949719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
111949719
NCBI-ProteinID:
XP_023822838
LinkDB
All DBs
Position
LG22:8913867..8952898
Genome browser
AA seq
2508 aa
AA seq
DB search
MSSRRYNFFLLGVTCLVFLTFSKSSGTLVRRSAHKGHEMQRLQRRTAGRYHHATVNYQVY
HTQWRMTTTSKPKLKQKQYHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKC
TKPRCLPRCHNRAVCRQPNICECRTGFYGARCEFASMTYGLVGLPWAFLRPTSPMVSTTT
TLSPTTTLSPTTVIPTTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKQALARG
GRGDKMTSILMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHVSPPAARNQT
AGHRGGTAAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAAVGP
GFRVFLCPMLCQNGGVCIQKDRCLCPPTFTGKFCHIPVATPSTNDIEKPPRITSVLASQQ
LLTQSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQ
SETVTWSAGLSGASTSVLPGERAAATPPKPRVQAQTLHGNSTYTESSVFKYCFREVRNGQ
CSSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNEC
LQPGFCENGNCVNTRGSYSCVCRQGYILDASHGICISHKVISEDKGQCYRILSSGSGPGS
CYVPILRNITKQICCCSRVGKAWGKNCKRCPYFGSVAFKEICPQGAGYHYSASVIPVQPE
VAGAAWDWRSTCHIPENGTDRPQQPASSGAQTPKLVTNNLQALSLPKPGLKHRYHYSAHN
SDRHQQPGGGGSLSSQGRPHIPTSSVYSRPTRVFDSCENDNSYQAASSQQAEALMCLDIL
SKCLGPVLVSPARPPTQTQWPPVDRRPVSPVRPVQPLPSLVTPRPPIPRPVRGVCETMPQ
VCGQGRCVDQPGERHTCICNEGYQLNAQQTRCQDIDECTASSPPCGSGRCQNTEGGYRCS
CPSGYQPGPQGTSCIDVNECLHTPSPCSVGECDNTPGGYRCVCPAGFRANFQQTQCQDID
ECRQVPNPCNNGRCENSPGSFKCVCRTGYKLEGNTCKDVDECEDPLRCPVQACVNSPGLY
KCVSCPPGFGLLNEQCSDVDECRQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKTCTDVD
ECEDPLRCPGQACVNSQGSYNCVSCKPGFSMINGQCSDIDECGQTLSPCTTGHCENTQGS
YSCTCVTGYRLHGDTCRDVDECADPSQCPGQECVNSLGSYKCVSCKLGFRLVDRHCTDVD
ECLHIPTPCAYGRCENTAGSYKCACRSGFRLQGNTCGDVDECENALQCPGQECINSEGSF
KCVACSPGFEAGNRQCTDIDECRQTSNLCANGRCENTPGSYQCVCRTGFKLQDSICIDID
ECEDPSQCPGQRCVNSEGSYKCVACKAGHGMQDGLCADVDECQSPDTCGVARLCVNTDGS
YRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPKGECVNTEGSYRCVCSQGYTTSSNGSSC
LDVDECARSGPGACQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQRC
ENTIGSYRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYTA
TSDGKGCVDENECETMQGVCGAAHCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGRPA
FPGGGSSSSSSSTTGLGPQRWLDASQLPPARPGELRECYYNTEEQSSCSVLARNTTQQEC
CCTVGQGWGMGCQYDPCPQLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKS
GVCVNNIPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGICLNILGSYFCTCEPPL
VLDDTRRSCVNSTGLAVDENLSFCWEYVTADLVCQSPLLGRQVTFTECCCLYGEGWGLQC
ALCPARDSEDYDARCNVFLRLPEFPPPFPDRYGPDPGPGPGRGGEGGGGGVGYRVPYGPN
SFPDPIPRRPEYPQPDYDDYTPPGGSRSGFRSRTPSTFSIPESPYRRPSGYIVLLXCCTV
GQGWGMGCQYDPCPQLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCV
NNIPGYSCYCTSGYYYDNVFLECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDD
TQRSCVNSTGLAVDENLSFCWQYVTPDLVCQSPLLGGQVTFTECCCLYGEGWGLQCALCP
ARDSEDYEARCNVFLRPPEFPPPFPDRYGPDPGPGRGGGGGYRLPYRPDSFPDPIPRRPE
YPRPDYDDYTPPGGSRSGFRGRTPSTFRVPESPYRRPSGYIPERHYDEDDYGPPDAPPRP
HFRTLPDPRSELAFGARPLPPIQEGLPLSLAPLPDSDPYSEEERPEPWRVGPPFPPFPDR
QGPGGGGGPRRVYERRYEPYAGLSTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMTS
MACIDINECVDPDNACANGQCIDTDGSYRCVCHRGYVMSRRPNRCVAA
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatataactttttccttcttggggtgacatgtcttgtatttcttaca
ttttcgaaatcttctgggacactagtgaggcgttcagcccataaagggcacgagatgcag
cggctgcagaggcgaacggcgggcaggtaccaccacgcgaccgtgaattatcaagtttat
cacactcagtggagaatgactacgacttcaaaacccaaattaaaacagaaacagtaccat
tttaatggaaagaagtactggaaatacgcaactaatgtgacacttcagttaaatgggact
aacgtatgtggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgc
actaaaccaagatgccttccacgttgccacaacagagccgtgtgcaggcagcccaacatc
tgtgaatgccgaacgggcttctacggggcccgctgtgagtttgcaagcatgacctacggc
ctcgtaggcctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccacc
accctttcaccaaccaccaccctctcaccaaccaccgtcatccccaccaccaccccagtg
cccactgagaccacagctgcatggaggacagaggggacaccagtcagcactgtgcgctgg
aaacctcttactctgcaggaggctcagtcagtgctgctaaagcaggcattggcccgtggg
ggccgaggcgacaagatgacctccatcctgatgaaacacatcgagacagagcggaagaag
cttcagtcagcctcaccgtcagacctacaggacacccggaccaccagtgtcaagagcttc
cacacccagaagggccagtacaccatccacgtgagcccacctgcagccagaaaccagacc
gccggccaccgaggaggaacagcagcaggaaggagaggagctgagcgcatcaaggtgctc
ttcaccccgaccgtctgcaaggtgcgctgcacccagggacgctgcaccaacttttgcgag
cagggcaatgtgaccgctctctacatcagtgaacagggggaccgggctgcggtgggaccg
ggcttcagagtcttcctgtgccccatgttgtgtcaaaatggaggggtctgcatccagaag
gaccgctgcctctgcccgccaaccttcaccggcaagttctgccacatccccgtggccacg
ccctccaccaatgacattgagaagcctccgcgcatcacctcggtgctggccagtcagcag
ctgctgacccagtcggagtacattctccccctgcagagccagcagcagagccacagtcag
cccagcggtgcatctggctcatccatggtgaaggtgcgggtgcagcacccaccagaggcc
agcgtgaagatccaccaggtgctgaaggtgggctatgggccaggcacggttagggagcag
tcggagacggtgacctggtcagcaggcctctcgggggccagcaccagtgttctgccaggg
gagagggccgcagccacaccacctaaacccagagtccaggcccagaccctccacggtaac
tccacctacacagaatcttctgtgttcaagtactgcttcagagaggtccgcaacggccag
tgcagctcacctctcccaggactcaggagtcaggacacctgctgcagagggattggactg
gcctggggcatcaacgagtgtgtcctatgtccccctaacacaggaaatggagtcgatggg
agctgtccggctggatttgagaggatcaacggcacccagtgtgttgatgttaatgagtgt
ttgcagccaggcttctgtgagaacgggaactgtgtgaacactcgggggagctacagttgt
gtctgcaggcaaggatacatactggacgcctctcacgggatctgtatctcccataaggtg
atctcggaggataagggccagtgctatcgtatcctgagctctggctctggccctggtagc
tgctacgtgcctatccttaggaacatcaccaagcagatctgctgctgcagccgcgtgggc
aaggcctggggcaagaactgtaagaggtgtccctactttggatcagttgctttcaaggag
atctgcccgcagggcgctggctaccactactctgcctctgtcattccagttcaaccagag
gttgctggagcagcatgggactggaggtccacctgtcatatcccagagaacgggacagac
aggccacaacaaccagccagtagtggtgcacagactcccaaactagtcaccaacaatctt
caggctctctcactccccaaaccaggcctcaaacacaggtatcactactctgctcacaac
tccgaccgacaccaacagccaggtggtggaggctccctgtcctcccagggcagaccacac
atcccaaccagctctgtttacagcagacccacccgggtgtttgacagctgtgagaatgac
aattcatatcaagctgcctcttctcaacaagcggaagctctgatgtgtctagacattctc
agtaaatgtttaggtccggttttggtttctccagctcggccccccactcagacccaatgg
cctccagttgaccgacggccagtatctccagtgagacccgtccagcccctcccatctcta
gtcacgccccgcccacccatccccaggccagtgcggggtgtgtgtgagaccatgccccag
gtgtgtggacagggccgttgtgtggaccagcccggagagagacatacctgcatctgtaac
gagggataccaactcaacgctcagcagactcggtgtcaagacatagacgagtgcacggcg
tcttctccgccctgcggaagcggccgctgccagaacacagaagggggctacaggtgcagc
tgtccctctggataccagccgggaccccagggcaccagctgtatagatgtcaatgagtgc
ctccacacccccagtccctgttccgttggggagtgtgacaatacaccaggcggctacagg
tgtgtgtgtcctgctggtttcagagccaacttccaacagacgcagtgtcaagatattgac
gagtgtcggcaggttccgaacccctgtaacaacggccgctgtgagaatagccctggtagc
ttcaagtgtgtctgccgcactgggtacaagctagagggcaacacgtgtaaagatgtggat
gagtgtgaggaccccttgaggtgtcctgttcaggcctgtgtcaactctccaggattatac
aagtgtgtgtcttgcccgccaggctttggcctgctcaacgaacaatgctcagatgttgac
gagtgccgtcagacccccagcctttgcaccaatggtcgttgtgagaacactcctgggagc
tacaggtgtgtttgccacacaggatacaaactacaaggcaagacctgcacagatgtggat
gagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttac
aactgtgtgtcctgcaagccaggcttcagcatgatcaatggacaatgctcagatatagat
gagtgtggtcagaccctcagcccgtgcaccaccggtcactgtgagaacacccagggtagc
tacagctgtacgtgtgtcactggctacagactacacggtgatacctgtagagacgtggat
gaatgtgcagacccgtcccagtgccctggccaggagtgtgtgaactccctgggctcatac
aagtgtgtgtcctgcaagctaggctttaggctggtcgacagacactgcacagatgttgac
gagtgcctccacatccccactccctgtgcttacggccgttgtgagaatacggctggaagc
tacaagtgtgcgtgccgatctggcttcaggctacagggcaacacctgcggagatgtggat
gagtgtgagaacgctctgcagtgtcctggtcaggagtgtatcaactctgagggctccttc
aaatgtgtggcatgtagcccaggctttgaggctggaaacagacagtgtacagatatcgat
gagtgccgccagacctccaacctatgtgccaacggtcgctgtgaaaacaccccgggtagc
taccagtgtgtttgtcgcaccgggttcaaactacaggacagcatctgtattgacattgat
gaatgtgaagacccctcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctac
aagtgtgtcgcctgcaaagctggccacggtatgcaagatgggttatgcgcagatgtggat
gaatgccagagccctgacacctgtggtgtagcgaggctgtgcgtgaacacggacggctcc
taccgctgtgactgtcagccaggctacagaaccgctggcctcggacgccagtgtagagac
gtcaatgagtgtctcgagggggagtactgcttccccaagggagagtgtgtgaacacagag
ggctcctaccgctgtgtgtgctcccagggatacaccaccagcagcaacggaagctcctgc
ctggatgtggatgagtgtgccaggtcaggcccgggggcgtgccaggatgggcgctgtgtc
aacacagagggctcctaccagtgccagtgccaagtgggattcaccaccaacccagagaag
acagcctgtctggatgtagatgagtgctcagagggagcagtgtgtcggtcacaacgttgt
gagaacaccattggctcctaccgctgtatcacctcctgtgagccgggctaccgggtcacc
cgcaccggagagtgcgtcgatatcaatgagtgtgccaatgaaaccgtatgcggggagcat
gcattctgccagaacctaattggaacataccagtgcatgtgtgaccagggctacacagcc
accagcgatgggaagggatgtgtggatgaaaacgagtgtgagactatgcagggcgtgtgt
ggcgcggcgcactgtgagaatgtggatggctccttcatgtgtgagtgtccaggagagggg
gaggagtttgatacgcgctcaggacagtgcctcagcacaccccgaccaggtcgtccagca
ttccctggcggcggctcctcttcttcgtcttcctccaccaccggtctcggtccccagcgt
tggctcgatgcgtcccagctgccccctgcccggcctggcgagttgagggagtgttactac
aacaccgaggagcagagctcgtgcagcgtgctggcccgcaacaccacccagcaggagtgc
tgctgcaccgtgggccagggctggggcatgggctgccagtatgacccctgtcctcagcta
ggcacagccgagcaccaggcgttgtgccccagcggacgaggatatgttaccgggccagga
gcatttagctacaaagatgtggatgagtgtaagctgttccaccctgaggtgtgtaagagc
ggtgtatgtgtcaacaacatccctggctactcctgctactgcaccattggctactactac
gacgacgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgt
ccagggggaatctgcctcaacatattaggctcatacttctgtacctgcgagccccctctt
gtgttggacgacactcggcgcagctgtgtcaattccactggcctcgccgtggatgagaac
ctatcgttctgctgggagtatgtcacagcagacctagtgtgtcagagccccctgctgggc
agacaggtcaccttcactgagtgctgctgtctgtatggagagggctggggactgcagtgt
gctctgtgtcctgccagagactcagaggactatgacgctcgctgtaacgtcttcctgagg
ctcccagagtttcctccccccttccctgaccgctacgggccggacccagggccaggaccc
ggcagaggaggagagggaggaggaggaggagtggggtatcgcgtgccctatggaccgaac
tccttcccagaccccatcccccgcaggcctgagtacccccagcctgactatgacgactac
acaccaccagggggcagcaggtctggcttcagaagcagaacgcccagcaccttcagcatc
ccagagagcccatacagacggccctcaggatacattgtgttactganctgctgcaccgtg
ggccagggctggggcatgggctgccagtatgacccctgtcctcagctaggcacagccgag
caccaggcgttgtgccccagcggacgaggatatgtgactgggccaggagcgtttagctac
aaagatgtggatgagtgtaaactgttccaccctgaggtgtgtaagagcggtgtatgtgtc
aacaacatccctggctactcctgctactgcaccagtggctactactacgacaacgtgttt
ctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatc
tgcgtcaacacattaggctcacacttctgtacctgcgtgcctcctcttgtgttggacgac
actcagcgcagctgtgtcaattccactggcctcgccgtggatgagaacctgtccttctgc
tggcagtatgtcacaccagacctggtgtgtcagagccccctgctgggcggacaggtcacc
ttcactgagtgctgctgtctgtatggagagggctggggactgcagtgtgctctgtgtcct
gccagagactcagaggactatgaggctcgatgtaacgtcttcctgaggcccccagagttt
cctccccccttccctgaccgctacggtccggacccagggccaggtagaggaggagggggg
gggtatcgcctgccatatagaccggactccttcccagaccccatcccccgcaggcctgag
tacccccggcctgactatgacgactacacaccaccaggggggagcaggtctggcttcaga
ggcagaacgcccagcaccttcagggtcccagagagcccatacagacggccctcaggatac
attcctgagcggcactatgacgaggacgactacggcccgcctgatgctcctccgagaccc
catttccggaccctcccagaccctcgttctgagcttgcctttggggcgcgaccccttccc
cccatccaagagggcctccctctgagtctggcccccctcccggacagtgacccctatagt
gaggaggagaggccagaaccctggcgtgtgggaccccctttccctccgttccctgacaga
caggggccaggtggtggtggtggaccacggagagtctatgagagacgatatgagccgtat
gcaggcctgagcacagaggactgtgggatactgcacggctgtgagaacggcaggtgtatc
cgggtggcggagggatacacgtgtgactgctacgagggctacgagctggacatgacctcc
atggcctgcatagacatcaatgaatgtgtggatcctgacaacgcgtgtgcgaacggccaa
tgcatcgacacagacggctcctatcgctgtgtgtgtcaccgcggctacgtcatgtctcgt
cggcccaaccgctgtgtggcggcataa
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integrated database retrieval system
