Salvelinus sp. IW2-2015 (Arctic char): 111949720
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Entry
111949720 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111949720
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111949720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111949720
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111949720
Intermediate filaments
Intermediate filament-binding proteins
111949720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
111949720
NCBI-ProteinID:
XP_023822839
LinkDB
All DBs
Position
LG22:complement(8977271..9038713)
Genome browser
AA seq
2431 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVQTLNTAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LAAQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQIMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDAXQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELGPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLGYVDQGQDLTSVNKHLKKLQVSSSSSYAGVAMSRSTL
QLLTREHSRSCTEKFTEFATETGSVGQGRVTAVNQMVDELIELRPRTDDRRGHEGRPASD
GVNEALGRPPGAHGDPGTDAGRLAPAPKVLAQIDDKQRSCRGCGHAGWHCQHHTLQRLMQ
SFEHDIQLLVTQVSSRRVRVAPDHLRRAEAEAIAGREQEVMHCWRXLLTSCEECRVQITT
ATDKLRFFGVVRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVEARSKSVLQ
CIEMGKTLLAARNPAAEEIKEKLDXVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVA
EAWLTAQEPFINSMELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQ
SKLPPTPLLGRKVFLDPQEXSPARSQGSPLMRRIIYEQAEHRAERPSQEPLPSSVARRLG
STVANYTPIMNGSSGYRSSLEAWAIPGMGGVVGGVVGVAAGLGTTAMEARGVATNLGTTT
AMEVRGVATGLGTAASEARGLAVGLVTPAVEAKGIAATLVTGAAAAVEVKASQYLRQPKI
KHMDDMVTPMLVACRLEKVREKEVREKEAREREQRERERDIVLMEPAPVMPVMAEVVLQE
MGREGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEVLM
IQARRDELPQEVWRERAERKERKKADVQRAGGHGHEGRRKDRTGRRDRSPVNTTQPRSSQ
TDVLLEQLKEREAATARGEVSKVPNGVPEXSSGRPDRPRARDRPKPRRRPRPKDHSAGEA
TTRRSRSAPEPGMAQSVSPSVPQPPSHTAHHEGFLFRKLDIETMRKSSNSRSWVNLYCVL
NKGEIGFYKDAKNTTTPYNNEHMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKD
ESQDDLKAWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRG
ERPQRAERSERSDKGETKSDTKRSEKSSKKK
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccagcgccagctcaacaacaac
aatacccgtctggccagcagctcgggacactgggaaaccgaggtcaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggattgctgacctctac
aacgacctccgggacggctacatgctcacaaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggggattaagatcgagtgtgacgacaacagggagacgcgatcggcaaaggatgcccta
ctactctggtgccagatgaaaaccgctgggtactctgaggtcaacatccagaacttcacc
acatgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgagttccataagctgatccggtccaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctagggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgac
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcag
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatattaataaggcgtgggagaggctg
gagaaggcggagcacgagagaggcgtggcactacggcaggagctgattcgccaggagaag
ctggagttgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggccggggagatggagacggagggctactacgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggccctgcagaagaccttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagtg
caggcagagagggtgcagacccttaacacagccgctctcaaattcaccaccattgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtctgaggcctggatccgtgagaagagctccatc
ctggccgcccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagatcatgaagaag
ggcaagcagatcctgatggagaagagttttggcacgggcggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaacttcttccagttcagcacggagacggacgacttgttggcatggctg
caggacgcctaccgcctggtttccagtgaggactttggccacgacgagtactccacccag
tcactgctcaagaagcaccggggtgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcaagaatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggttgcacgacgcgctggctgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtggaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggttagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
natcagtacgtggggagtgacctgggtggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggctatctcgcacccggccaaggccatggaggtcctggagcccttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctagaggaggccgagaggctg
atcaaccgccacgcggccctgaaggaggagatcgggaggtacgaggaggactacgagcga
ctgcaggcggtcaacgagctgctggaggccgaggaggcgccgctgccatatgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctcgtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggctcacgttgagctccccaccacg
gtggagacagtggaggctgccatcaagaagcacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgcatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggctttcatg
gccgagctggcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgggcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggatctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagctacaccagcctggaccatcggctgcaccagctggag
ggacaactgggctacgtggaccagggtcaggacctgactagcgtcaacaagcatctcaag
aagctccaggtctcttcctcttcctcatatgccggggtggcgatgagccgcagcaccttg
cagctactgacacgagagcactctagatcctgcacggagaagttcacagagtttgcgacg
gagacgggcagcgttggtcaggggcgtgtgacggcggttaaccagatggtggacgagctg
atcgaactacggccacgcaccgacgaccgacgcgggcatgagggacgtccggcaagtgac
ggcgtgaacgaggccttgggccgacctcctggagctcatggagacccgggcacagatgct
ggccgcctcgcaccagctccaaaagtcttggcccaaatcgatgataagcagcggagctgc
cgcgggtgcgggcacgccgggtggcactgccaacaccacaccctgcagaggctcatgcag
agcttcgagcacgacatccagctgctcgtcactcaggtgagctccaggagagtgcgggta
gctccggaccatctacgccgggcagaggctgaggccatcgccggccgggaacaggaagtg
atgcattgctggaganngctcttgacttcctgcgaggagtgccgagtgcagatcaccacg
gcaacagacaagctgcggttcttcggggtggtgcgagaccagatcatgtggatggacagc
atcatctctcagatcggcacaggggacaatccaagggatgtgtcctcagtggaggtactg
atgaactaccaccagagcttgaagagcgaggtggaggcgcgcagtaagagtgtgctgcag
tgcatcgagatgggcaagacgctgctggccgcgcgcaaccctgctgctgaggagatcaag
gagaagctggatamggtggtggccaagcagtacgagctgtctgagaaatgggacaaacac
tgggaggtcctacagcacatgctggaggtgcaccagtttgcgcaggaagcggtggtggct
gaggcctggctcacggcccaggagcccttcatcaacagcatggagctgggcgccagcgtg
gacgaggtggagcagctcatccgccgccacgaggccttccgcaaggccgccgccacctgg
gaggagcgcttcagctcgctacgacgcctcaccacggtggagaagatgaaagcagagcag
agtaagctccctcccacccccctgttgggtcgaaaggtgttcctggacccccaggagayg
tcccctgcccggagccagggctcccccctgatgagacggatcatttacgagcaggccgag
cacagagctgaaaggccctcccaggaacccttgccctcctccgtggcccgccgcttggga
tccaccgtggccaactacacccccatcatgaacggctctagtggctaccgcagcagcctg
gaggcctgggccatccccgggatggggggagtggttggaggtgtagtgggggtggcagcc
ggcctgggaacaaccgccatggaggccagaggggtagcaacaaatttagggaccacaacc
gccatggaggtccgaggggtggcaacagggttggggactgccgcctcggaagccaggggg
ttggcagtaggattggtcacccccgcggtcgaggccaaagggatagctgcaaccttggtg
actggtgcagccgcagcagtggaggtgaaagcctcacagtacctccggcagcctaagatc
aaacacatggacgacatggtgacgcccatgctggtggcctgtaggctggagaaggtgaga
gagaaagaggtgagggagaaggaggcgagagagagggagcagagagagagggagagagat
attgtgttaatggaaccagcgccggtcatgccggtgatggccgaggtggtgctccaggag
atggggagggaggggatgggcagggagaggctgaatagcgagcccagcagcagagaccac
cgggcggggagcagccggtcggagccccagcagagagacagggacagagacagtagggac
agtagggacagtcacagggaagccaggctggagcgccagcactccagtgaggtgctgatg
atccaggcgcggcgggatgagctgccccaggaggtgtggcgggaacgggccgagcgcaaa
gagaggaagaaggcagacgtccagcgagcaggagggcacggacacgagggccggaggaaa
gaccgcaccggacggagagacaggagtccagtgaacacgacacagccaaggagcagtcag
acagacgttctactggagcagctaaaagagagagaggcagcaacggcccgaggggaggtc
tctaaagtgccgaacggcgtgccagagawgtcttccggacgtccagaccggccgcgagca
cgggaccgccctaagccccggcggagacccaggcccaaggaccactctgcaggagaggcc
accacccggcggtcacgctcggcgccagagccagggatggcccagagtgtgagcccctca
gtcccccagccgcccagccacacagcccaccacgagggcttcctcttccgcaagctggac
atcgagaccatgaggaagagctctaacagcagatcctgggtcaacctgtactgtgtgctg
aacaaaggagagataggcttctataaggacgctaagaacaccaccacaccttacaacaac
gagcacatgctcaacctcggccactgccactgcgacgtcacccttggatacaagaagaag
aaaaacgtctttacacttaaaacgaaagacggaagtgaatttctgttccatgcaaaggat
gagtcacaggacgatctaaaggcctggaccaccaacatcaacaagagcatcgcagagcat
gaggagattgccaaatggggtcagccccagcctactacctcatccacggacgagggcacg
cgccgcgacggcagcaaggccgataacaagtcagaacggggagaaaagtctgaccggggg
gaaaggccgcagagagccgagcgctctgagaggtcggataagggtgagaccaaatcggac
accaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
