Salvelinus sp. IW2-2015 (Arctic char): 111949786
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Entry
111949786 CDS
T05762
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111949786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111949786
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111949786
Protein recycling
Other Rab GTPase associated proteins
111949786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Rep_N
Motif
Other DBs
NCBI-GeneID:
111949786
NCBI-ProteinID:
XP_023822902
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All DBs
Position
LG22:complement(18641874..18643498)
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AA seq
428 aa
AA seq
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MSVLCPRLQMEEAAAYANNHQGAAQSQPAIAPFSKFEEENQGEAQSTPSPSVSRKPLETD
RTTREFIDFLKTLKPGREIFKQCRAFTESTACKRDNIRQSLQANSALVPQDLGADELSEC
GQDFYQNLSDHLQTHFKGSSERVESAMDEVERYMMTRLYDEVFCPETTDDEKKDLAVQKR
IRALHWVTIEMLCVPVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLTCITRCSKHKFNA
IKTTKKKAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMSGEDGYYFTNLCC
GVAFIEKLDGRSLNLSAEEFELHMSGRASPQRPQAAPSPPGSAAFSEMNERLDLLTGLGV
RQERVMEGARRLESDLIVDWRDGVEHKVQDVLERFPLEMHPSASSAIDADNVENDFLPPP
LQPQLFAG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctgtgtcccaggttacagatggaggaggcagcagcatacgctaacaaccac
cagggggcagcccagtcccagcctgccatcgcacccttcagcaaatttgaagaggaaaac
caaggagaagcccagtcgacccccagcccctcagtgagccgcaagcccttagagacggac
cgcaccacacgagagttcatcgacttcctcaagacactgaaacctggtagggagatcttc
aaacagtgccgggccttcacagagagcacggcctgcaagagggacaatatacgacaatcc
cttcaagctaatagtgcgctggttccacaggacctgggtgctgatgagctgtctgagtgt
ggtcaggacttctaccagaacctgtcagaccacctgcaaacacacttcaaagggtcgtcg
gagcgcgtggagagtgcgatggacgaggtagagaggtacatgatgacacgtctctacgat
gaggtcttttgtcctgagaccacagacgatgagaagaaagacctggctgttcagaagaga
atcagggccttgcattgggtcaccattgagatgctgtgtgtccctgtggatgaggagatt
cctgaggtgtctgataatgtggtcaaagccatcactgacgtgatagagatggactcgaag
cgtgtgcccagggacaagctgacctgcatcacgcgctgcagtaagcacaaattcaatgcc
atcaagaccaccaagaagaaggcggcatctgctgatgacttcctgcccaccctcatctac
atcgtcttgaaggccaaccctccgcgactgcagtccaacattcagtacatcacccgcttc
tgtaaccctagccgcctcatgagcggagaggatggatactactttaccaacctgtgctgt
ggggtggccttcatagagaagcttgatggccgttctctgaacctgagcgctgaggagttt
gagctccacatgtcaggccgggcgtccccccagcggccccaggccgccccctccccccca
ggcagtgctgctttcagcgagatgaacgagcgtctggacctgctgacggggctgggcgtg
aggcaggaacgcgtcatggagggagctcgccgcctggagagtgacctcatcgtcgactgg
agggacggggtggagcacaaagtgcaggatgtgttggagaggttccccctggaaatgcac
ccctccgcctcttctgccatagacgctgacaatgtggagaacgacttcctgcctcctcct
ctccagccccagttgtttgccggctga
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