Salvelinus sp. IW2-2015 (Arctic char): 111949813
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Entry
111949813 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: stAR-related lipid transfer protein 13
KO
K20632
deleted in liver cancer protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111949813
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111949813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
Tra1_central
SAM_2
Motif
Other DBs
NCBI-GeneID:
111949813
NCBI-ProteinID:
XP_023822925
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Position
LG22:complement(19452626..19561516)
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AA seq
1177 aa
AA seq
DB search
MYRHLSDRDSVPQGPGSECLGSSMSQDSQDCLGSMTQESQDIYLRMDHHRRRSGYRLGRI
IARQQLLRRIAGELEAKEACDWLXSGRIPQYAQLFEDSQFPIDISPVKKDHDFLDNDLVE
PLCSQLAVQRPYSPYSQPASCPQALLSSQCVVFLCIQSEDSDEEDLFAISDRWKFECTSR
RWSRLKGEGQSPREGEGRGLQTTTSSESVLTDLSEPEVSSLHSESSGWSGHQAVSTEDSD
XSNRNYYDSAAMPEPDSTSLTLPHLPKHLPYYGSLPAKNGRVGRTRAKDFLHRMETLRSR
GTLGRGHCKKLVISAPVLQTEPQALKTLRCVEITSGDGSGAEVPTGGPILGLTPQCPSSS
EGSHSSGSTVSSPSLKERKPHSQRTDRSDAKRSGMYLEDLAVFSSLQRISGVAQGKRGVX
EHNQRNEFRSYEDLVVHIPKDHKPGTFPKALSIESLSPTLGASVPWHSDHVNPLEPQSNP
HPTSNPREFHHRRLTQFCPRGSRISVYDNVPGSHLYASTGDLLDLEKEDLFPHLDDILQH
VNGLQQIVDHWSKNMLPSAGLDGXGIQPAGLKSSSQITLDFEGTSVLEGQSTSSDGDRDG
VSLIETHCTGHRERRDSGVGASLTRPNRLRWPSFQMSNRLSHSVASLQITNQSAGQLSLL
QKFSLLRLTAIMEKYSMSNKHGWTWSVPKFMKRMKVPDYKDKNVFGVPLIVHVQRSGQPL
PLSLQQALRYLRSQCLDQVGLFRKSGVKSRIQALRQMNESSPDDVSYEDQSAYDVADMVK
QFFRDLPEPLLTSKLGETFLHIYQYVPKDQRLQAVQTAIMLMSDENREVLQMLLCFLSDV
TSSVEENQMTPMNIAVCLAPSLFHLNILKKDNLSPRAMQRKYTTGRPDQKDLNENLAATQ
GLAHMIIECNRLFEIPHEMVTQSRNSYVEADLHAPTLEELCRQQEEDDASYQTEARPCQT
HSETRPQNLYQNYVESRLQELLKEAREKAKGWVSCTSSDNTELYCKKVGDGNPLRRWRVA
VEVEAPPSVLLNRVLRERHLWDVDLLQWKVAETLDRYTEMFHYVLNRMPPHPSRDFLVLR
SWRTDLPKGTCALVCVSVEHEDCPRVGGVRAVVLESNYLLEPCGSGKSRLTHICRVDLKG
RSPEWYNKAFGHLCAAEAARIRNSFQPISTEGPETKI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggcatctgtctgacagagactctgtgccccaggggcctggcagtgagtgtctg
ggaagcagtatgagtcaggacagccaggactgtctgggcagtatgacccaagagagccag
gatatctacctaaggatggaccaccaccgccgtcgctccggataccgcctgggacgcatc
attgcccggcaacagctactccggaggatagctggagaactcgaagcgaaggaggcgtgt
gattggttanngagcggcaggattccccaatacgctcagctctttgaagactctcagttc
ccmatcgacatctctcctgtgaagaaagaccatgactttctggacaacgacctggtggaa
cctctctgcagccagctagctgtccagaggccctactcgccctactctcagccagccagc
tgtccacaggccctactgtcgagtcagtgtgttgtcttcctgtgtattcagagtgaagac
tctgatgaggaggacctgtttgccatcagtgacagatggaagtttgagtgtacgagccgc
cgctggtccagactaaagggggaggggcagagtcccagggagggggaggggcggggccta
cagaccaccaccagtagcgagagtgttctaactgacctcagcgaaccagaggtctcatct
ctccacagtgagagcagtggrtggagtggccaccaggctgtgagcacagaggactcagac
trctctaaccggaactactacgactctgcagcgatgcctgaacctgactccacctccctt
accctaccacacctccctaagcacctcccctactacggctcgctgcccgccaaaaacggc
cgcgtcggacggacccgagccaaggacttcctgcaccgcatggagacactacgttcccgg
ggcacgctggggagggggcattgcaagaagctggtgatcagcgctccggtattgcagaca
gagccgcaggccctgaagacgctgcgctgcgtggagatcaccagtggggacgggtcgggg
gcggaggtacccactgggggaccaatcctagggctaaccccccagtgcccctccagcagc
gagggcagccactccagcggcagcactgtctcatcccccagtctgaaggagaggaagccc
cactcccagcggacggaccggtccgacgccaagcgcagtggcatgtatctggaggacttg
gccgtgttctccagcctgcagcggatcagtggcgtggcccaggggaagaggggcgtgrcc
gaacacaatcagcgtaacgagttccgctcctacgaggacctggtggtccacatccccaaa
gaccacaagcctggcaccttccccaaggccctgtccatagagagcctctcccccaccctg
ggggcctctgtcccctggcacagcgaccaygtcaaccccctggagccccagtccaacccc
caccctacctctaacccgagggagttccaccaccgccggctcacccagttctgcccacgg
ggcagtaggatcagtgtgtacgacaacgtccctgggtctcacctctatgcctctactgga
gacytgctggacctggagaaggaagacctgttcccccacctggatgacatcctgcagcac
gtcaayggcctgcagcagatagtggaccactggtccaagaacatgctgccctctgcaggc
ctggatggacakgggatccagcctgcaggtctgaagtcatccagccagatcacgctggac
tttgaggggacgtctgttctggagggacagagcacatccagtgacggggacagagacggc
gtgtccctcattgagactcactgtacaggacacagagagaggagggactcaggggtggga
gcatcactaaccagacccaaccgtctgcgatggcccagcttccagatgtccaaccggctc
agccactcagtggcctcgctccagatcaccaaccaatcagcaggccagctcagcctgctg
cagaagttctctctcctccgcctcactgccatcatggagaaatactccatgtccaacaaa
cacggatggacctggtcggttccaaagttcatgaagaggatgaaggttccagactacaag
gacaagaatgtgtttggtgttcctctgatcgttcacgtccagcgctctggtcagcccctc
cccctcagcctgcagcaggccctccgatacctcaggagccagtgtctagaccaggtgggt
ctgttccgtaagtctggtgtgaagtctcgtatccaggcgctgaggcagatgaatgagtca
tctcctgatgatgtcagctacgaggaccagtcagcgtacgacgtagcagacatggtcaaa
cagttcttcagagacctgcctgaacctctactgaccagcaagctgggagagaccttccta
cacatctaccagtatgttcctaaggaccagcggttgcaggctgtgcagacggccatcatg
ctgatgtcagacgagaacagggaggtgctccagatgctgctctgcttcctgtctgatgtt
acttcctctgtggaggagaaccagatgactcccatgaacatcgctgtgtgtctggccccg
tccctgttccacctcaacatcctgaagaaggacaacctctcacccagggccatgcagagg
aagtacacaacaggacggcccgaccagaaggacctgaatgagaaccttgccgcgacgcag
ggactcgcccacatgatcatagagtgcaaccgactgtttgagattccccacgagatggtg
actcagtccaggaactcgtacgtggaggcggaccttcacgctcccaccttagaggagctc
tgtagacagcaggaggaggatgatgcgtcctaccagacagaggccagaccctgccagaca
cactcagagaccagaccgcagaacctgtaccagaactacgtagagagcaggctgcaggag
ctcctgaaggaggccagagagaaggctaagggctgggtgtcctgcaccagctcagacaac
actgagctctactgtaagaaggtgggtgatgggaaccctttgcggcggtggcgtgtggcg
gtagaagtggaggcccctccctcggttttgttgaaccgcgtgctgcgagagcgccacctg
tgggatgtggacctgctacagtggaaggtagctgagactctggacagatacactgagatg
ttccactatgtcctcaaccgcatgcccccacaccccagcagagacttcctggtcctacgg
tcatggaggactgaccttcccaaggggacgtgtgcattggtgtgtgtgtctgtagaacat
gaggactgtccccgggtyggtggggtgagggccgtggttctagagtccaactaccttcta
gaaccctgcggctctgggaaatccagactcactcacatctgcagggtggacctcaagggg
aggagtccagagtggtacaacaaggcctttggtcacctctgtgctgctgaagctgctcgc
attcgcaactccttccaaccaatcagcacagaggggccagagaccaagatctga
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