Salvelinus sp. IW2-2015 (Arctic char): 111949853
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Entry
111949853 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111949853
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111949853
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111949853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
HeH
FYVE
Motif
Other DBs
NCBI-GeneID:
111949853
NCBI-ProteinID:
XP_023822955
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Position
LG22:complement(367393..378152)
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AA seq
366 aa
AA seq
DB search
MWTSCCNWFCLDTATVEESNSSMRHQAYTNSGYSSYPSPPLPEHTCKACGSRFVTLARKH
VCVDCKKNYCGRCSAQIEPRQRLCHTCQRFHGTLFERTELMKLKVKDLRDYLHLHEVSTQ
MCREKEELVELVLGQQTSSSSGPIINPLNQTQTPTVTQHETTPLPAPTTTTTTTPSTHPD
STSTDHVPSQLPPTQEGSQTPSVLVPLGPEEPLDTERDTELQGEQELQSSDTDEVLAPGR
RASLSDLATADDIEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLYHDQKDLQNLVS
STNDGTDPSGNPGQEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVRA
VHIFRA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgtcctgctgtaactggttctgtctggacactgccacggtggaggagagcaac
agcagcatgcgtcaccaggcctatactaactcaggttacagcagctacccgtcgccccca
ctcccggaacacacgtgcaaagcctgcggaagccgcttcgtcacccttgccagaaagcat
gtctgcgtggactgcaagaagaactactgcggcagatgttcggcccagattgagccccgg
caacgcctttgccacacttgccagcggtttcacggcacgcttttcgagcgcaccgagctg
atgaagctcaaggtgaaggacctgcgcgactacctccacctgcacgaggtttcaacacag
atgtgccgtgagaaagaggaactggtggagctggtcctgggacagcagacatcatcatcc
tctggcccaatcataaaccctctgaaccaaacacagacccccactgtgacccagcatgag
acaactcctcttccagcccccactactactaccaccaccacaccctccacacaccccgac
tccacctccacagaccatgtcccttcacagctgccacccactcaggagggcagtcagacc
ccgtctgtgttggtgcccttgggtcctgaggagccactggacactgagagagatacagag
ctgcagggagagcaggagctgcagtcctcagacacagatgaggtgctggcgccaggccgc
agggcgtcgctgtcagacctggccacggcagacgacatcgaggccctcagcgtccggcag
ctcaaggagatcctagcccgtaactttgtcaactacaagggctgctgcgagaagtgggag
ctaatggagagggtcacccgcctctatcacgaccagaaggacctccagaatctggtttca
agtacaaatgacggcacagaccccagtggtaaccctggccaggaggagaacctgtgtaag
atctgcatggactctcctattgactgtgtcctgctggagtgcggccacatggtcacctgc
accaagtgtggcaagcggatgaacgagtgccccatctgcaggcagtatgtggtgcgcgcc
gttcacatctttagagcctga
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