KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111949897
Entry
111949897         CDS       T05762                                 
Name
(RefSeq) host cell factor 2 isoform X1
  KO
K27390  host cell factor 2
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:salp00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111949897
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    111949897
   03029 Mitochondrial biogenesis [BR:salp03029]
    111949897
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL-HCF complex
     111949897
Mitochondrial biogenesis [BR:salp03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    111949897
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 Kelch_FKB95 fn3 NANM Beta-prop_TYW4
Other DBs
NCBI-GeneID: 111949897
NCBI-ProteinID: XP_023823003
LinkDB
Position
LG3:6845403..6851813
AA seq 762 aa
MDPLWKKVNSFTGPIPRSRHGHRAAAIRELIIVFGGGNEGIAEELHVYNTVSKQWFLPAV
RGDIPPGCAAHGFACEGTRILIFGGMVEFGKYNNSLYELQASRWLWKKLKPRPPKNGMPP
PCPRLGHSFTLIGNKCYLFGGLANDSEDPNGNVPRYLDDFYELELQSVSGVKGWNIPDTK
GVGPWARESHTSVAYTGSGSPKLYIFGGMRGSRLDDLWQLDLESMTWSTPDTKGPPPLPR
SLHSANVIENKMYVFGGWVPVPETDKPNALGAEWICTNSLSVLNLDTMTWQSLGPDQQQG
QTVSQGDQEEPQPSSGGPRARAGHCAASIGSRLYIWSGRDGYRKSWNYQVCCQDLWYLET
ERPSTPAAVLLVKSTVSMLHVAWRPLPAAECYILQLQPVSPFNTPANPTARPSTGAQERN
PQDQDVQSAQVPDDPTSQEAQNTSQQEVAAGQKMTPMEVSVAVRDPHPEGESDASGKTQS
EPLGHEADPTKTSQPSDTVASSEHQPGQEPDTTSSDLNTVKCKVSGEKSDESEWFXAGVF
KTLFSEVTHYYLSPGNDFIXTIYSRPTNTKDIKLQGPQDYEWREKQELCPGVAYRFRVAG
INSCGQGDFSPASEFKTCQPGFPGAPSSVKITKANDSVHITWDSPTSPSGKILEYSMYLA
VRKSRSSSSSSEHPGQLAFIRIYRGTKTSCTVSPAHLANAYIDSSAPNRPAVVFRIAAKN
EQGYGPATQIRWLQDASKLKASSSQPDGSPTEAEQEAADSSG
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggacccgttatggaaaaaagtaaactcatttactggacctattccccggtcaagacac
ggacaccgagcagcggctattcgggaacttattatcgtgtttggaggtggaaacgagggg
atagcggaggagctccatgtttacaacaccgtttctaagcagtggtttctcccagcggtg
agaggggacatccctccaggctgtgctgcccatggttttgcctgtgagggaacccgcatc
ctgatctttggaggcatggtggagtttggcaaatacaacaacagcctgtacgagytacag
gcgagccgctggctgtggaagaagctgaaacccaggccacccaagaacggcatgccgccc
ccstgtccccgcctcggacacagcttcaccctcattgggaacaagtgctacctgttcggg
ggactggccaatgacagtgaggaccccaatggcaatgtmccaaggtacctggatgacttt
tatgagctggagctgcagtcagtgtcaggggtgaagggttggaacattccagatactaag
ggcgtgggtccgtgggctcgagagtcccacacgtcggtagcatacactggatcaggctcc
cccaaactctacatcttcggaggaatgagaggcagtcgccttgacgacctctggcagctt
gacctcgaatctatgacatggtctacacctgacactaaaggaccccctcctctacccaga
agccttcactctgccaacgttatagaaaacaagatgtatgttttcggggggtgggtcccc
gttccagagacagacaaacctaacgccctgggagctgaatggatctgtaccaactcctta
tccgtgctcaacttagacaccatgacatggcagagcctaggcccagatcagcaacagggg
cagacagtgagccagggtgaccaggaagagccccagcccagcagcgggggaccccgagcc
agggcaggccactgtgctgcctctatcggctcccgcctctacatctggagcggccgtgac
ggctaccggaagagctggaactaccaggtgtgctgccaggacctgtggtatctggagaca
gagcggccctccaccccagcagcagtactactggtcaagtccacggtcagcatgctccat
gtggcctggcggcccctacctgcagcagagtgttacatcctccagctgcagcccgtctcc
ccctttaacaccccagccaaccccacagcccgacccagcacaggtgcacaggagaggaac
ccccaggaccaagatgtccagtcagctcaggtcccagacgaccccacctcacaggaagcc
cagaatacatcccaacaggaggtggctgcagggcagaaaatgactcccatggaagtgtca
gtggctgttagagacccccatccagagggggagagtgatgctagtggaaaaacacaatcc
gagcccttgggacatgaggctgaccccacaaaaacctcccagccctcggacacagtggcg
agcagtgaacaccagccaggacaagaacctgacaccacttcctcagatctcaacactgtc
aaatgcaaggtatctggtgagaaatcagatgagtctgagtggtttgmtgctggagtgttc
aaaaccctgttttctgaggttacccactactacctgtcacctgggaatgactttattycc
accatctacagcagaccyactaacactaaagatattaagttgcaggggcctcaggactat
gagtggagggagaagcaggagctgtgtccaggtgtagcctacaggttcagagtagcaggc
atcaacagctgtggtcagggagacttcagccctgccagcgagttcaaaacctgccagccc
ggcttccctggagcaccctcttctgtcaagatcaccaaggctaatgactcggttcacatc
acatgggactcccccacctccccgtcaggtaagatcctggagtactccatgtacctggcg
gtgaggaagagccggtccagcagcagcagctctgagcaccctggccagctggccttcatc
aggatctaccgcggcaccaagacctcttgcactgtcagccccgcccacctggccaacgcc
tacattgacagctccgcccccaaccggccagctgtcgtcttccgcatcgccgccaagaac
gagcagggctacgggcccgccacacagatccgctggctacaggatgccagtaaactcaaa
gcctcgtcgtcacaaccagatggcagccccacggaggcagaacaggaggcagcagacagc
tcaggttga

DBGET integrated database retrieval system