Salvelinus sp. IW2-2015 (Arctic char): 111949897
Help
Entry
111949897 CDS
T05762
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111949897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111949897
03029 Mitochondrial biogenesis [BR:
salp03029
]
111949897
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
111949897
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111949897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
fn3
NANM
Beta-prop_TYW4
Motif
Other DBs
NCBI-GeneID:
111949897
NCBI-ProteinID:
XP_023823003
LinkDB
All DBs
Position
LG3:6845403..6851813
Genome browser
AA seq
762 aa
AA seq
DB search
MDPLWKKVNSFTGPIPRSRHGHRAAAIRELIIVFGGGNEGIAEELHVYNTVSKQWFLPAV
RGDIPPGCAAHGFACEGTRILIFGGMVEFGKYNNSLYELQASRWLWKKLKPRPPKNGMPP
PCPRLGHSFTLIGNKCYLFGGLANDSEDPNGNVPRYLDDFYELELQSVSGVKGWNIPDTK
GVGPWARESHTSVAYTGSGSPKLYIFGGMRGSRLDDLWQLDLESMTWSTPDTKGPPPLPR
SLHSANVIENKMYVFGGWVPVPETDKPNALGAEWICTNSLSVLNLDTMTWQSLGPDQQQG
QTVSQGDQEEPQPSSGGPRARAGHCAASIGSRLYIWSGRDGYRKSWNYQVCCQDLWYLET
ERPSTPAAVLLVKSTVSMLHVAWRPLPAAECYILQLQPVSPFNTPANPTARPSTGAQERN
PQDQDVQSAQVPDDPTSQEAQNTSQQEVAAGQKMTPMEVSVAVRDPHPEGESDASGKTQS
EPLGHEADPTKTSQPSDTVASSEHQPGQEPDTTSSDLNTVKCKVSGEKSDESEWFXAGVF
KTLFSEVTHYYLSPGNDFIXTIYSRPTNTKDIKLQGPQDYEWREKQELCPGVAYRFRVAG
INSCGQGDFSPASEFKTCQPGFPGAPSSVKITKANDSVHITWDSPTSPSGKILEYSMYLA
VRKSRSSSSSSEHPGQLAFIRIYRGTKTSCTVSPAHLANAYIDSSAPNRPAVVFRIAAKN
EQGYGPATQIRWLQDASKLKASSSQPDGSPTEAEQEAADSSG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacccgttatggaaaaaagtaaactcatttactggacctattccccggtcaagacac
ggacaccgagcagcggctattcgggaacttattatcgtgtttggaggtggaaacgagggg
atagcggaggagctccatgtttacaacaccgtttctaagcagtggtttctcccagcggtg
agaggggacatccctccaggctgtgctgcccatggttttgcctgtgagggaacccgcatc
ctgatctttggaggcatggtggagtttggcaaatacaacaacagcctgtacgagytacag
gcgagccgctggctgtggaagaagctgaaacccaggccacccaagaacggcatgccgccc
ccstgtccccgcctcggacacagcttcaccctcattgggaacaagtgctacctgttcggg
ggactggccaatgacagtgaggaccccaatggcaatgtmccaaggtacctggatgacttt
tatgagctggagctgcagtcagtgtcaggggtgaagggttggaacattccagatactaag
ggcgtgggtccgtgggctcgagagtcccacacgtcggtagcatacactggatcaggctcc
cccaaactctacatcttcggaggaatgagaggcagtcgccttgacgacctctggcagctt
gacctcgaatctatgacatggtctacacctgacactaaaggaccccctcctctacccaga
agccttcactctgccaacgttatagaaaacaagatgtatgttttcggggggtgggtcccc
gttccagagacagacaaacctaacgccctgggagctgaatggatctgtaccaactcctta
tccgtgctcaacttagacaccatgacatggcagagcctaggcccagatcagcaacagggg
cagacagtgagccagggtgaccaggaagagccccagcccagcagcgggggaccccgagcc
agggcaggccactgtgctgcctctatcggctcccgcctctacatctggagcggccgtgac
ggctaccggaagagctggaactaccaggtgtgctgccaggacctgtggtatctggagaca
gagcggccctccaccccagcagcagtactactggtcaagtccacggtcagcatgctccat
gtggcctggcggcccctacctgcagcagagtgttacatcctccagctgcagcccgtctcc
ccctttaacaccccagccaaccccacagcccgacccagcacaggtgcacaggagaggaac
ccccaggaccaagatgtccagtcagctcaggtcccagacgaccccacctcacaggaagcc
cagaatacatcccaacaggaggtggctgcagggcagaaaatgactcccatggaagtgtca
gtggctgttagagacccccatccagagggggagagtgatgctagtggaaaaacacaatcc
gagcccttgggacatgaggctgaccccacaaaaacctcccagccctcggacacagtggcg
agcagtgaacaccagccaggacaagaacctgacaccacttcctcagatctcaacactgtc
aaatgcaaggtatctggtgagaaatcagatgagtctgagtggtttgmtgctggagtgttc
aaaaccctgttttctgaggttacccactactacctgtcacctgggaatgactttattycc
accatctacagcagaccyactaacactaaagatattaagttgcaggggcctcaggactat
gagtggagggagaagcaggagctgtgtccaggtgtagcctacaggttcagagtagcaggc
atcaacagctgtggtcagggagacttcagccctgccagcgagttcaaaacctgccagccc
ggcttccctggagcaccctcttctgtcaagatcaccaaggctaatgactcggttcacatc
acatgggactcccccacctccccgtcaggtaagatcctggagtactccatgtacctggcg
gtgaggaagagccggtccagcagcagcagctctgagcaccctggccagctggccttcatc
aggatctaccgcggcaccaagacctcttgcactgtcagccccgcccacctggccaacgcc
tacattgacagctccgcccccaaccggccagctgtcgtcttccgcatcgccgccaagaac
gagcagggctacgggcccgccacacagatccgctggctacaggatgccagtaaactcaaa
gcctcgtcgtcacaaccagatggcagccccacggaggcagaacaggaggcagcagacagc
tcaggttga
DBGET
integrated database retrieval system