Salvelinus sp. IW2-2015 (Arctic char): 111949940
Help
Entry
111949940 CDS
T05762
Name
(RefSeq) short stature homeobox protein 2-like isoform X1
KO
K09331
short stature homeobox protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111949940
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111949940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
HAUS1
KBP3
AcrF31
Motif
Other DBs
NCBI-GeneID:
111949940
NCBI-ProteinID:
XP_023823064
LinkDB
All DBs
Position
LG22:complement(3324814..3332075)
Genome browser
AA seq
305 aa
AA seq
DB search
MEELTAFVSKSFDQKVKEKKEVITYREVLETGSARAREGLATEPSREEMNDIARVDARSP
GREPDMLGPERTRDVGSPKLIDGTTHMKDRKEDTKQMEDEAQTKIKQRRSRTNFTLEQLN
ELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKDVLSFLPGV
LIGAASQFEGCRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHAHHHLHS
HLAAHAPYMMFPGPPFGLPLATLAAESASAASVVAAAAAAKNTNKNSSIADLRLKAKKHA
AALGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttaccgcatttgtgtcgaagtcatttgatcagaaagtgaaggaaaagaag
gaggtgatcacgtaccgggaggtgctggagaccggatccgcgcgtgccagggagggtctc
gccaccgaacctagtcgcgaggaaatgaacgatatcgctcgggtagacgcgcgatcgcca
ggcagggaaccggacatgctgggaccagagagaaccagggatgtgggaagcccgaaactg
attgatggtaccacgcacatgaaagacagaaaagaagacacaaagcaaatggaggacgag
gcacagactaaaatcaagcagaggagaagtcggactaactttacactggagcaattgaac
gagctcgagcggctattcgatgagactcattacccggatgccttcatgcgcgaggagctg
agccagcggctagggctgtccgaggctcgagtacaagtttggtttcagaaccggagggcc
aaatgcagaaagcaggagaatcagttacacaaagatgtcctatcttttcttccaggagtt
ctcattggagccgcgagtcagtttgaaggttgtcgtgtagcgccatatgtcaacgtgggg
gccttacggatgccattccaacaggatagtcattgcaacgtgccgcccttctcctttcag
gtccaggcgcaactgcagttggacagcgcggtggcccacgcgcaccatcacctgcactct
cacctggcagcgcacgctccttacatgatgtttccgggcccgccatttggtttgcccttg
gctacgctcgcggctgaatctgcctctgctgcctcggttgtggccgcagctgcagccgcc
aaaaacaccaacaaaaactccagtattgcagatctgagactcaaggccaaaaaacacgcg
gcagctctgggactgtga
DBGET
integrated database retrieval system
