Salvelinus sp. IW2-2015 (Arctic char): 111950049
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Entry
111950049 CDS
T05762
Name
(RefSeq) transmembrane and TPR repeat-containing protein 1-like isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111950049
Glycosyltransferases [BR:
salp01003
]
O-Glycan biosynthesis
O-linked Man type
111950049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_16
TPR_8
TPR_11
TPR_14
TPR_19
TPR_12
TPR_10
TPR_7
TPR_15
TPR_6
ANAPC3
FAT
TPR-S
TPR_9
TPR_5
TPR_MalT
TPR_3
Wzy_C_2
TPR_20
SNAP
Mad3_BUB1_I
NatA_aux_su
RPN6_N
BTAD
TRAPPC9-Trs120
FAM101
Motif
Other DBs
NCBI-GeneID:
111950049
NCBI-ProteinID:
XP_023823151
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Position
LG3:complement(7687907..7709818)
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AA seq
546 aa
AA seq
DB search
MKAQAYEGVSGETEFCSVCFFESFPLPAITQPFYSTTEQEGTLGRYHGRQAWCVCFVSGR
AIQLTEARAFQLNPLAVLFRERTISAGMGYCILVAHGLGRLCSVVGRWGTTALTVSTLLL
LLLFSWKTVQQNDIWLSREALFRSGIQTLPHNAKVHYNYANFLKDRGRHQEAIHHYKTAL
RLYPRHASAMNNLGTLTRHPEDAEHYYRTALDTNPQHNRALFNLGNLLKSQGKMEEAEAL
LRDSIRFGPHFADAYSSLASLYAEQKRFAEANDVYLQGIESCPDSSDLHNNYGVFLVDTG
EGALAAAHYQHAVRLKPAHYVAMVNLGRLLRSSSENKEAESWYKKALQVTRKVDILTPLG
ALYYNTGRYEEALQVYREAATLQPDSTDIWLALAQVLAMAGRSKEAEKMTLGIISKQGSC
IECYRLLSAIYSKRGNNTEALDALDKALLQNPLDMSVRAELHFSKGNQLREMNQLDRAFE
SYKLVVELKPDQSQAWMNMGGIQHIKGDYAAARQYYQRALILTPGSKLLKENLAKLDRLE
RRLTGA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaagcgtacgaaggcgtctccggggaaacagagttctgctccgtgtgtttt
tttgagagctttccgctgcctgcaatcacacaaccattttactccacgacagagcaagag
ggaacgctgggacgttatcatggcaggcaggcttggtgtgtgtgttttgtgtctggcagg
gctatacaactgacagaggcgcgggcgttccagctgaatccattggcggtgcttttcaga
gagaggacaattagcgcaggtatgggttactgtatcctggtggcccatggtctggggagg
ttgtgttctgtggtgggtcgctggggcaccacggcgctgaccgtctccacyctgctgctc
ctcctgctcttctcctggaagaccgttcagcagaacgacatctggctgtcccgggaggcc
ctcttcaggtctggcatccagacgttgcctcacaacgccaaggttcactacaactatgcc
aacttcctgaaagacagagggcgccaccaagaggccatccaccactacaaaactgctctc
aggttgtaccctcgccatgccagtgctatgaacaacctgggtactctgacacgccaccca
gaggatgccgagcactactacaggaccgccctggacaccaacccccagcacaacagagcc
ctgttcaacctgggaaacctgctcaagtcccaagggaagatggaagaggcagaggctctg
ttgagagactccattcggttcggtccacacttcgctgacgcctactccagtctagcatca
ctttatgcagagcagaagcggtttgcggaggccaatgacgtttatcttcaaggcatagag
agctgcccggacagctcggacctgcataataactacggagtgtttctggtcgataccgga
gaaggcgctctggcggcagcccactaccagcatgccgtgcgtctcaagccggcgcactac
gtcgccatggtaaacttgggccgcctccttcgctcctccagtgagaacaaggaggcggag
tcttggtacaaaaaggccctgcaggtgacgaggaaggtggacatcctgacgccactaggg
gcgctgtactacaacacaggacgctatgaggaggctctgcaggtgtaccgcgaggcggct
acgctacagccagatagcaccgatatctggctggctctggcacaagtgttagccatggca
ggccgctctaaagaggcagagaagatgactctgggcatcatatcgaagcaggggagctgc
atcgagtgttaccgcctactgtctgccatctacagcaaacgaggcaacaacacagaggct
ctggatgctctagacaaggcactactgcaaaaccccttagacatgtctgtcagggcagag
cttcacttctccaagggcaaccagctcagagagatgaaccagctggacagagccttcgag
agctacaagctggtagtggaactaaaacctgaccaatcgcaggcttggatgaacatggga
ggaattcaacatatcaagggagactatgcagcagccaggcagtactaccagagggccctg
atcctaacccctggctccaagctgctgaaggagaacctggccaagctggaccggctggag
aggaggctgaccggggcctag
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