Salvelinus sp. IW2-2015 (Arctic char): 111950087
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Entry
111950087 CDS
T05762
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111950087
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111950087
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
111950087
NCBI-ProteinID:
XP_023823209
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Position
LG3:complement(7838080..7845675)
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AA seq
943 aa
AA seq
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MVQLSPSPARDVSPSPECSEKGRQGSLKAGSPKIGSPGGLSPLQLALAASTTIYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLEGQEGVEERSRWSSKEVEKRRLCIVLQVKFLLQTLLQHEHIREDLLSAR
KLQVAELQSLLELAELLGVKRDNNVSLEDQMERAALVYLDLLEGTNKAVAGTTYKVLKAK
LAKLMECGYFDCVPPPPSKSPKEVEDPMTKKTVSQTASLSTLMMSNKKDVPSREFLNRHY
LPDTDPNGCRDTPITQNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVP
VTSKKHAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIR
GSFSFMQDSLLDGEGSPTNGHPRLGRHASGSPSPLVQRDSRRSPVDLLPKTLHSTPLPSK
LLPVDDEPSLTNGDGGCLESCDLDLTTEDLAHVITIDPCLLLSESESACPSPPAPPPLYR
RESSISITLDEKTSSRTPISESGKQSPCNGVVPPCTPTQGQPFSTPPSRRTLTMAPPVPF
QTMHSVFKVNAPLLPTGDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEHLQSVNQSE
CLVGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSFIP
QAHLYGARDTGYQHSYRRXGGNTGQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQG
VGMDLTPQVTPHAPHTLMHVPMYPLPQHPQLLRVAFTAARTANYTPGTLDQPIAFDQLHS
NLGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHE
TASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgtctctccttcacctgagtgctccgag
aaggggaggcaggggagcctgaaggcaggtagccccaagattggctcccctggtgggctg
agtcctctccagctggccctggcagcctccaccaccatctaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcac
aagacccttggtggcctaacacaggaactgctagaaggacaggaaggcgttgaggaaagg
agcagatggtcaagcaaggaggtagagaagaggaggctgtgcatagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcagggaggacctcctctctgcccgc
aagctccaggttgcagagctacagagcctgcttgagcttgctgaactactgggggtgaag
agggacaacaatgtgagtttggaggatcagatggagagagcygccctggtctacctggac
ctgctggaggggacaaataaagccgtagccggaaccacctacaaggtcctgaaggctaag
ttggcgaagctgatggartgtgggtactttgattgtgtaccgccgcctccgagcaagagt
cccaaggaagtygaggatccgatgacsaagaagacggtgtctcaaacagccagcctctct
accctaatgatgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactac
ctgcctgacacagaccccaatgggtgtcgagacactcccattactcagaactggaaggct
gagttccaggctatgaaggaacaggagccaccggactcatgggatatggagtccgactcc
actcagcctgtaatccagaaaccatggagaggggcggctgtgttaatctccaaagttcca
gttacctccaagaaacatgccgaacccaaacagagaagagcgaagtccaaaagggagcgg
gacgccacagcggcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttcc
ttgcccaaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatcaga
ggctccttcagcttcatgcaggattctcttctggatggagaaggatcacccactaacggc
catcctagactgggccggcatgcctctggatccccctctccactcgtacagagagattca
aggagaagcccagtggaccttctccccaaaacactgcattccactccattgccttctaaa
ctcctccctgttgatgacgaacccagtctgaccaatggagatgggggttgcctagagagc
tgtgacctggacctaactacggaggacctggctcacgtcataaccattgatccatgtctg
ctgctgtccgagagtgagtctgcctgcccctctcctccagctcctcctcccctctaccgt
agggagtcctccatctccatcaccctggacgagaagacctcttctcggactcccatctct
gaatccggtaagcaatccccctgtaacggtgtggtgcctccttgtacccccacccaaggg
cagcccttttcaacccctcccagcagacgtacactcaccatggccccccctgttcccttc
cagaccatgcattcggtattcaaggtgaacgcccccttacttccgactggagactttaaa
tctgatattatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccag
accccaccggagtttgctccgtcggaggacgaacacctacagtcggtgaaccagtctgaa
tgtctggtgggtagtggtgggcagatcttcctgtcccctggccaatcaggtggcaccatg
ggccgttctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggcaag
gggttggcacactcctactttcgctcttctggtgggcacagaggaggaagcttcatcccc
caggctcacctgtacggagctcgggacactggctaccaacacagctacaggcgcygtgga
ggcaatacaggacaaaggcacaataatagtggttggagtgactcctcccaggtgagcagc
ccagaccgggagggcaactactccctggtggactccgcccacggcgactcgctgcagggt
gttggcatggacctcaccccccaggtgacccctcatgccccccacaccctgatgcacgta
cccatgtacccgctcccccagcatccccagctcctccgcgtggccttcacagcagcccgc
acagccaactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagc
aacctgggggaaatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacc
tacgtcttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctg
atgcgcaacgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgag
acggccagcaaccactccatcctgcagctgtaccaaggagaccaggtgtggctgcggctg
caccgcggctccatctatggcagcagctggaagtacagcacattctctggcttcctgctc
taccaggactga
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