Salvelinus sp. IW2-2015 (Arctic char): 111950170
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Entry
111950170 CDS
T05762
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111950170
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111950170
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111950170
NCBI-ProteinID:
XP_023823339
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All DBs
Position
LG23:complement(42679586..42685170)
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AA seq
231 aa
AA seq
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MYVSYLLEKEPSMYPNPVRHPSLNLNHQNFVPAPPQYSDFSGYHHVAGINNDPHHSQTGA
WNPAYPPSREEWSPYGPGTGPSTSNPGPIGYSPPEFSPVPQSGLLPSINSSVGQLSPNSQ
RRNPYDWMRRSVPPANSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATS
LSLSERQVKIWFQNRRAKERKVNKKKMQQPQPASTTTPTPQALACLATLPW
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggaacccagcatgtacccaaatccagtgcgacat
cccagcctcaacttgaaccatcagaactttgtccccgcacctccgcagtattcggatttc
agcggataccaccacgttgctgggattaacaatgaccctcaccacagccagacgggggcc
tggaaccccgcttacccgccgagccgggaagagtggtcaccctatgggccggggacagga
ccgtccacatctaatccggggccaatagggtatagtcccccagagttctctccagtccca
caatccggtcttctcccgtctatcaactcatctgttgggcagctgtctcccaattctcag
cgcagaaacccttatgattggatgaggcggagcgtaccaccggcaaattcaggtggtaag
acaagaacgaaagacaagtaccgggtggtgtacacrgatcaccagcggttggagctggag
aaagagttccactatagccgctacatcaccatcaggaggaaagcagagctggccacgtct
ctcagcctctcagaacgacaggtaaaaatctggtttcagaatcggcgtgccaaagagagg
aaagtgaacaagaagaagatgcagcagcctcagcctgcgtccacaacaacacctactccc
caggctctggcatgcctggcaacgttgccatggtga
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