Salvelinus sp. IW2-2015 (Arctic char): 111950204
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Entry
111950204 CDS
T05762
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111950204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111950204
04090 CD molecules [BR:
salp04090
]
111950204
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111950204
CD molecules [BR:
salp04090
]
Proteins
111950204
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
C2-set_2
Ig_2
C2-set_3
Lep_receptor_Ig
TMEM154
LapA_dom
Orf78
CrgA
DUF6476
V-set_CD47
TRP
Motif
Other DBs
NCBI-GeneID:
111950204
NCBI-ProteinID:
XP_023823380
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Position
LG23:13371559..13384572
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AA seq
451 aa
AA seq
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MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCRIRNAHRSHVEWKNPNGHVMFFNDH
KALRNKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLEKNTYSSLDVLHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGSKTVSRWPGTQVSTE
KPTATALDWPNTKRSPASTPDSQLSPHSQPAHSVFEATGYTLANDSSSNSTSTTDWSSVS
QTTENTPHNGTRTNSTNARGIFDETERQRGNGSSAPLLIFLVTCLILGLLVVVVFFVIKL
RRAHILWKKENEDSDQSVESSRSKSSNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTT
TNTKTEEAPEMQIIPQTDGATLSPQIKETEL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggatccgttgcagtg
caacatatgaccgtgatggagggtgagactctaaccattaagtgtcgcattagaaatgcc
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgaggaataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaaatcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatgtcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggttcaaaaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagccctcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagcagcaactcaaccagtactaccgattggtcgtcagtgtcc
cagacaacagagaacacacctcataatggcacaagaaccaactccactaatgctagagga
atcttcgatgagacggagaggcagagaggaaatggaagcagtgcgccgttgctcatcttc
ctcgtgacgtgcctcatccttggtctgctggtggtcgttgtgttctttgtaatcaagctg
aggagggctcacatactctggaagaaagaaaatgaagactctgatcaatctgtggagagc
agcagatcaaaatcaagcaatgaagagaaacaatccagaagaaggggaaatggacttttt
aacattggattcacaaagtatgtcgttgaggaaccaatggcaacagagacgacaacaaca
acaaacaccaaaacagaagaggctcctgaaatgcaaatcatcccacaaacagatggagca
accctaagccctcagatcaaggagacggaactgtaa
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