Salvelinus sp. IW2-2015 (Arctic char): 111950229
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Entry
111950229 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2-like isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111950229
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111950229
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111950229
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
111950229
NCBI-ProteinID:
XP_023823412
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Position
LG23:complement(27273497..27315655)
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AA seq
346 aa
AA seq
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MSRPSSAGGGGGGLGSGKTGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAS
LPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYASAGCLLSLHHSEKPDHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMCXAAQMWKHRPTGLSRSQTYTCDGQKPVHSD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctgcgggcggtgggggcggaggactcggttccgggaaaacagga
ggaggaaagcacggcggttcgggaggagctgctgcctcagctgcagccgccggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcatcg
ctacctgggcaatctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gtcctgccaccgattctgcaatgccaggccggacatctagtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcttctactctaccgtttccttgtaagtacgcgtcagccggatgcctg
ctgtccctccaccacagtgagaagcctgatcacgaggaggtgtgtgagttccgtccctac
acctgcccgtgccccggggcctcctgcaagtggcagggctccctggaggctgtcatgccc
cacctgatgcatgcccacaagtccatcaccaccctgcagggagaggacatcgtcttcctg
gcaacagacatcaacctgccgggggccgtggactgggtcatgatgcagtcctgcttcggc
caccacttcatgctagtcctggagaagcaagagaagtacgagggccaccagcagttcttt
gccgtggtgctgctcatcggaacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacaccccgctccatccacgacggt
gtggcggccgcaatcatgaacagcgactgtctggtctttgacacgtccatcgctcacctg
tttgccgacaacggcaacctggggatcaacgttaccatttccatgtgctyagcggctcag
atgtggaaacacagacccacaggcctctctcgttctcagacttacacgtgcgatgggcag
aaaccggtgcacagtgactga
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