Salvelinus sp. IW2-2015 (Arctic char): 111950258
Help
Entry
111950258 CDS
T05762
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111950258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111950258
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111950258
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111950258
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
111950258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
111950258
NCBI-ProteinID:
XP_023823454
LinkDB
All DBs
Position
LG23:3848241..3955952
Genome browser
AA seq
761 aa
AA seq
DB search
MDPGGLKHSNNKDKGLAFGKLSESGVEGSFSGDAGGSKSTTSTSLMHLPGSRPQPPARDS
ANGLNATTTQMELSTGGLTIEEAEVKVMEKALRMQQPQKPQQNQQLFENFALLEASIADL
NRSNTPGSSVLGRPHDLFSLKTENFSPMDKDRLDMGSVSFGQSQKDLDVNERLLGDNTMD
ILHDLDLPGSLSDLNEFYVSDEAAFLSSLSVEDVLLEDGNMETKPIDCSNGGNCTNVDSV
DQQKQLLEPGISMPVIKTEEDADTSFIQLCTPGVIKQENDRRSYCQISSLDLPSTHNSVG
SMSGPSYPYGANTSTAVSLQQDQKPVFGLYPPLPSVSDSWNRGNGYGAGSGMSSSSFPVG
FSSPTARPEASGSTPSAPAKPSGPTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGW
RARQNTDGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLIRLKGQQ
TTMEPSPPPPDERACALIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTL
NRLGGQQVVSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCF
APDLVINDERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQ
AVFDEIRMTYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEMVGGLLQICFYTFVNK
SLSVEFPEMLAEIISNQIPKFKDGSVKPLLFHHALNHDTMP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggtggactgaaacacagcaataacaaggacaagggcttggctttcggtaaa
ctctcagagagcggtgtagaaggaagcttctcgggtgacgcaggtggttccaagtccacc
acatcaacctccctgatgcatctgccaggctccagaccccagccaccagccagagactcc
gccaacggactgaatgccactacgactcagatggagctttccacagggggactcactata
gaggaggctgaagtgaaggtaatggagaaggcccttagaatgcagcagccacagaaaccg
cagcagaaccaacagctgtttgagaactttgctctgttggaggcgagtattgcagatttg
aatcgatccaacaccccagggagctctgtacttggacgccctcatgaccttttctctctg
aaaacggagaacttctcacccatggataaggacaggcttgacatggggtcagtcagcttt
ggacagtcacagaaggacttggatgtcaacgagaggctccttggcgacaatacaatggac
attctgcacgatttggacttgcctggctctctgtctgacctgaatgagttttacgtgtct
gacgaggctgctttcctttcctccctgtcagtggaggatgtcctgctcgaggacggcaac
atggaaaccaagcccatagactgtagcaatgggggaaactgtacaaatgtggacagcgtg
gaccagcagaagcagcttctggagccaggcatctccatgcctgtcatcaagacggaggag
gatgctgacacctccttcatccagctttgcaccccaggggtcatcaagcaagagaatgat
cgtcggagctattgtcagatatccagcctggacttgcctagtacccacaactcggtgggr
tccatgagcgggccgagttacccctatggagcaaacacctcgacagcagtgagtctacag
caggatcagaagcctgtctttggcctgtatcccccactgccatcggtcagtgacagctgg
aacagaggcaatggatacggggctggatcagggatgtcgagctcatcttttcctgtcggc
ttcagcagtccaacggcgagacccgaggccagcggctccacgccgtcagcccctgccaag
cccagcggtccaacccataagatctgcctggtgtgttcagatgaggcgtctggttgccac
tatggagtcctcacctgcggaagctgcaaggtcttcttcaagagggccgttgaaggatgg
agagcacgacaaaacacagatggacaacacaactatctgtgcgctgggaggaacgactgc
atcatagacaagatccgcaggaagaactgcccggcgtgccgcttccgcaagtgtctccaa
gcagggatgaatctggaagcgaggaaaaacaagaagctgatccgattaaaaggtcagcag
acaacgatggagccgagccctcccccacctgacgagagggcctgcgccctgatccccaag
tccatgccccagctggtacccaccatgctatccctgctcaaagccatcgagccggaggcc
atttactctggctacgacagcaccattcccgacacctccacccgcctcatgaccaccctc
aacaggctgggcggacagcaggttgtctcagctgtcaaatgggccaagtccctaccaggg
ttccggaaccttcacctggatgaccagatgaccctgctgcagtgctcctggcttttcctc
atgtcgttcggcttgggctggcgctcctaccagcagtgtaacggggggatgttgtgcttc
gcccctgacctggttattaatgatgagaggatgaagttgccctacatgaccgaccagtgt
gagcagatgctgaagatctccactgagtttgtgaggctgcaggtgtcctatgacgagtac
ctgtgtatgaaagtcctgctgctgctcagcacagtaccaaaagatggattgaagagccag
gctgtgtttgatgagatccgcatgacctacatcaaggagctggggaaggccatcgtcaag
cgggaagagaactccagccagaactggcagaggttctatcaacttactaagctactggac
tccatgcaggagatggtggggggcctcctgcagatctgcttctacacttttgtgaataaa
tcccttagtgtggagttccctgaaatgctggccgagatcatcagcaaccagataccaaaa
ttcaaagatgggagtgtcaagccgcttctgtttcatcatgccttaaaccatgacacaatg
ccttaa
DBGET
integrated database retrieval system
