Salvelinus sp. IW2-2015 (Arctic char): 111950298
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Entry
111950298 CDS
T05762
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111950298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111950298
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111950298
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Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
111950298
NCBI-ProteinID:
XP_023823534
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Position
LG23:complement(28597269..28618949)
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AA seq
1271 aa
AA seq
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MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKASKKGKKATGEKGKGGAAK
GAGLGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSVNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYVILWHLSKVSEGSSTKADMVTLRKQMRAFCLMCQSYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSSREQLEALIYTPDSSLQAELLNFILDHVFIDQDDDNNST
DGQHDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSKKAKPASTGKRK
LPEAEESSSCSTDAVWMNREQNVQTPVMMPSPHLSSTVLRDPKKMRPEESYMGVYSMTSE
QQQPLPPQQQHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQHAIRRSS
GLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSSI
MDDSVLNVSMF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaggagttgcacacagagtttcagtttcctcaggaggctgatacacag
ttgtcctctgacacagaccttgaggaccctgatgtcaaaaatgcaaagcttgggaaagga
aaggcgagtaagaaggggaagaaagccactggagagaagggaaagggtggggcagcgaag
ggtgctggccttggccgggtgaatggccaccaccaggagaatgggatggagaacatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacacagtctgtcgttgatgactggatt
gagtcttacaagaatgatcgagacattgcactcctggacttgatcaacttcttcatccag
tgctccggctgtaaaggtgctgtcagtgcagagatgttcaggcacatgcaaaactctgag
ataatcaggaagatgactgaggagtttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcaagcttttgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgatgagtacatgatggacacggttatctcgctg
ctcacgggtctgtctgactcacaggtccgagccttcagacacaccagcacactggcagcc
atgaagttgatgactgccttggtgaacgtggctctgaacctgagcatcaacatggataac
actcagaggcagtacgaggcagagaggaacaaggtcatggccaagagggccaacgatagg
ctggagctccttttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgattttcaaaggagtgtttgttcacagatatcgtgatgccatagctgaa
atccgggcaatttgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggtgaagtg
cgtctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcgg
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatgactctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgctcatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaggggatgcccaggaggggcaggcagagcgtcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagtctg
tgggagtgtgcaggggagctgctaaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgactgaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcacaggg
aagagggtcttgacagcgaaggagaagaaaacccagctggatgaccggacgagaatcact
gagattttcgctgtggcgttgcctctgttgttggctaagtactctgttgatgctgagaag
gtgaccaacttactgcagctgccgcagttctttgacctggaaatmtacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagctggtggacaag
ttcaacagactcctggaggacttcctacaggagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactgaagaggatcactgcgttccacaatgcgcatgacctctct
aaatgggacctgttcaccagcaactataagctactaaacacaggacttcagaatggtgat
atgcctgagcagattgtcattcatgcaatgcagtgcacacactatgtcatcctgtggcac
ctatccaaggtttcagagggcagctccacaaaggcggacatggtgaccctgaggaagcag
atgagggctttctgtctgatgtgccagagctacctcaccagtgtcaacaccaccgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatcgtgtcg
tcgagccgggagcagctggaggctctgatctacacgccagactcctccctgcaggccgag
ttgctcaacttcatcctggaccacgtcttcatcgaccaggacgacgacaacaacagcaca
gatgggcagcatgatgatgaagccagtaaaattgaggctttacacaagaggcggaacctg
ctggcagcgtactgcaaactgattatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcatcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaacctagccttcctggacattctcagc
gagttctcctctaaactgcttcgtcaggacaagaagactgttcacctctacctggagcgg
tttatgaccttccagatggccttgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtccgtyatcagcggctacagc
agccgaggttccagcatcaggagcaagaaggctaagccagccagcaccgggaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgctgtgtggatgaaccgggag
cagaatgtgcagacgccagtgatgatgccctcgccrcatctcagctccactgtgctgagg
gaccccaagaaaatgaggccggaggagagttacatgggcgtctacagcatgacatccgag
cagcaacaaccgctgcccccccagcagcagcaccatcagacccccatggactacaatacc
caggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcaggagcga
gccagcatgcagtatgccaagatgaggagccacatgcagcatgcaatccgccgcagttca
ggactcatggaggatgatgaggagccaatagtagaggatgtaatgatgtcatcagaggac
cgtttggaagatctcaacgagggcatggatttcgacactatggatattgatctgccacca
tcgaaaaatcgtagagagagatcggagctgaagcctgactactttgacccttcttccatc
atggatgattcggtcctcaatgtttcaatgttctaa
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