Salvelinus sp. IW2-2015 (Arctic char): 111950309
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Entry
111950309 CDS
T05762
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog
KO
K06788
coxsackievirus and adenovirus receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03267
Virion - Adenovirus
salp04514
Cell adhesion molecule (CAM) interaction
salp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
111950309
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111950309
04517 IgSF CAM signaling
111950309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111950309
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
CTX family
111950309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
Ig_C17orf99
Adeno_E3_CR2
EphA2_TM
FAM163
WBP-1
CCAP
Ig_PDGFR_d4
RSN1_TM
Ig_CD22
Syndecan
Orthoreo_P10
Cadherin_C_2
MscL
CR_prot_dom_plant
DUF5849
TMIE
SCIMP
Tweety
Prominin
Motif
Other DBs
NCBI-GeneID:
111950309
NCBI-ProteinID:
XP_023823545
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All DBs
Position
LG23:complement(24376284..24485617)
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AA seq
376 aa
AA seq
DB search
MDFSISHLCSVLIILIAGVAHCLEITSQGPTSIEKASSESVKLDCQFSLAPEDSGPLDIE
WSLLASDNQKEDKVVILYSGDRAYEDYYPAVKGRAHFNSADPKNGDASINLTGLKSSDTG
TYQCKVKKAPGIRSRKMLLTVMVRPSKPRCSADGLTLEGMDVVLRCTSSEGTNPLHYTWE
KTSDNKLLPASAVLDPVGGTMNVRNASTRSSGTYRCTAKNHVGMEECILQLGITPPPNTA
GIIAGAIIAVLLALIIIAIILFCCCRARNRKKYEKEISYEIREDVPPPKSRVSTARSFTS
VGSQRSSLGSMSPSNLHEYALKPQYDKIPSVEEYDRPPSHAPLPPPVASKMAGPNLSRMG
AIAVMIPAQNRDGSIV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcgatatcccacctctgctctgtattgattattctcattgcaggtgtagcc
cattgcctggagatcacgtcccaggggcccacgtccatagagaaggccagcagtgagagc
gtcaagctggactgccagttctctctggcacccgaggactctggccctctggacatcgaa
tggagcctgctggcctctgacaaccagaaagaggataaagtggtgatcctgtactctggg
gacagggcctatgaggactactaccctgcagtgaaggggcgagcccacttcaactcagct
gaccctaagaatggtgacgcctccatcaacttgacaggtctgaagtctagcgacactggg
acctaccagtgcaaggtgaagaaggccccgggcatccgcagcaggaagatgctgctgacc
gtcatggtgaggccgtccaagcccagatgctctgccgacggcctcaccctggagggtatg
gatgtggtcctgaggtgtacgtctagtgaggggaccaaccccctgcaytacacctgggag
aagaccagcgacaacaaactgctgcctgcctccgccgtgctagaccctgtgggaggcacc
atgaatgtaaggaacgcgtccaccagrtcctcaggaacctaccgctgcacagctaagaac
cacgtgggcatggaggagtgtattctacagcttggcatcactcctccccccaacactgct
ggtatcatagctggagccatcattgctgttctgctggccctcatcatcatcgccatcatc
ctcttctgctgctgccgcgcccgcaacaggaagaagtacgagaaggagatctcctacgag
atcagagaggacgtcccccctccgaagagccgcgtgtcgacggcccgctctttcaccagc
gtgggcagccagcgctcctccctgggctccatgtccccctccaacctgcacgagtacgcc
ctcaagccccagtacgacaagatcccctccgtggaggagtatgacaggccccccagccac
gcacccctgcccccacccgtcgccagcaagatggccggccccaacctcagccgcatgggc
gccatcgccgtcatgatccccgcccagaacagggacggctccattgtgtag
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