Salvelinus sp. IW2-2015 (Arctic char): 111950311
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Entry
111950311 CDS
T05762
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111950311
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111950311
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111950311
03029 Mitochondrial biogenesis [BR:
salp03029
]
111950311
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
111950311
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
111950311
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111950311
Prokaryotic type
Other AARSs
111950311
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
111950311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
ADIP
tRNA-synt_1
DUF29
tRNA-synt_1g
YabA
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
111950311
NCBI-ProteinID:
XP_023823548
LinkDB
All DBs
Position
LG23:20854561..20887993
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AA seq
650 aa
AA seq
DB search
MWQLELEIHSLTAEIESLKNQQSLGLSSHLDGLREENAKLKYRLNILKRSLQEERSQCSK
TMMNINQRLQEIFGEAIREAWPDLENPPLAVTPNQQAKFGDYQCNSAMAMAQVMMKSKGL
KVNPREIAEKIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLSGVQPPPLES
KKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGTQFGMLIA
HLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSKDPAFIKGWNL
ICDVSRNEFQKVYNCLDIQIIERGESFYQEKMIAVVKEFEAKGLVEMDEGRKIVFAPGQQ
IPLTVVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQGTHFQVVFAAAQMIGWYD
PKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEKDRDKVLSTEE
LTKAQHSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANI
DEVALRKAAETTDVLLQHDKEWKLGKCLMRFPEILQKILDDLLLHTLCDYLYELATTFTE
FYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaactggagctggagatccattccctgactgctgagattgagagcctgaagaac
caacagagcctgggcttgtcctcacacctggatgggctgagagaggagaacgccaagctc
aaataccgcctcaacatcctcaaaaggagtctacaggaagagaggagccagtgcagtaag
accatgatgaacatcaaccagcgtcttcaggagatctttggtgaggccatccgggaggcc
tggcctgacctggagaaccctcccctggccgtcacccccaaccagcaggccaaatttggg
gactaccagtgtaacagcgctatggccatggcccaggtgatgatgaaatcaaagggcctg
aaagtgaaccccagggagatcgctgagaagattcagcagaacattccagacaatgagctc
attgagaagaccgaaattgctggaccagggttcatcaatgttcaccttaagagatcgttt
gtgtccaaactgctgaccaacctgctactcagtggtgtccaacctcctcccttagagagc
aagaagaaggtggttgtggatttctcatctccaaatattgccaaggagatgcacgtaggt
cacctgcgctccaccataatcggggacagcatgtgtcgcctgtttgagttcctaggctac
gacgtgttgaggctgaatcatgtgggggactggggcacccagtttggcatgctcatcgct
cacctgcaggacaagttcccaaactacctgaccgtgtcccctcccattggagatctgcag
gcattctacaaagagtctaagaagcgttttgacgaggaggaggactttaagaagagggcc
taccagtgtgtggtcaagctgcagagcaaagacccagccttcatcaaaggatggaacctc
atctgtgacgtttccaggaatgaattccagaaggtctacaactgtctggacatccagatc
atcgagagaggagagtccttctatcaggagaaaatgatcgctgtggtcaaagagtttgag
gccaaaggcctggtggagatggacgagggacgtaagatagtgtttgccccgggccaacag
atccccctgacggtggtgaagtctgacgggggctacacatacgacacttcagacctggcc
gccctgcgccagcggctctttgacgagaaggcagacatcatcatctacgtgacggacagc
ggccagggcacccacttccaggtggtgtttgcagcggctcagatgattggctggtacgac
cccaaggtgacacgagtggagcatgctggctttggagtggtgctgggagaggataagaag
aagtttaagactcggtctggggacacggtgagrctgatggacctgctggacgaaggcctg
aagaggtccatggacaaactcaaggagaaagacagagacaaggtgctgagcacagaggag
ctgaccaaggcccagcactcggtggcgttcggctgyatcaagtacgccgacctgtcccac
aaccgcatcaacgactacgtgttctccttcgacaagatgctggatgaccggggcaacacg
gccgcctacctgctctacgccttcacccgcatcaggtccatagcccggctggctaacatc
gacgaggtggcgctccgtaaagcagcagagaccacggatgtgctcctgcagcacgacaag
gagtggaagctgggcaagtgtctcatgcgcttccctgagatcctgcagaagatcctggat
gacctcctgctccacacgctgtgtgactacctgtacgagctggccaccaccttcacagaa
ttctacgacagctgctactgcatcgagaaggaccgccagaccggtgaggtggtgaaagtg
aacatgtggaggatgctcctgtgcgacgccactgccgccatcatggctaaaggcttcgac
atcctgggcatcaacccggtttccaggatgtga
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