KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111950382
Entry
111950382         CDS       T05762                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111950382
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111950382
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_VPS8 Auxin_resp
Other DBs
NCBI-GeneID: 111950382
NCBI-ProteinID: XP_023823692
LinkDB
Position
LG23:complement(30609310..30638620)
AA seq 1761 aa
MAEEQCSEIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGIQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHVKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYDNTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCFWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELD
SHMDKVVVVQFCNNSYSLRFVSGSRDGTVRIWHYQQQEWKSITLDIATRLPGTAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDHRI
MLSAGHDGNIYMWDLSKGSKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKDEHLVPQLGYMANGDGEVVEQVIGQQTAEEGHGESPLDVLIRQLQDQP
DERRDQDGVPEGEGAVEGAEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSLYNTERRRKPVLSATKTEEQAPCKRSLRRT
QRKKTRPAPAYQTRSARDRRPVDRRRNSDSQMDSDSDGEAEEQAEASDASSDGEAQWQSD
SSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPVGSSSSEEAEGQGEEARRKQAEEKK
KPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQAYVR
AVRRAKAYSINPQKQSWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKMTNE
SFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGMRFRSIIDDAWWFGSVEDHQPLQPEYP
DSLFQCYTVKWDNSEREKMSPWDMEPIPDEAELPEDVGDGVVVTEEEVKARLYSPQEGEW
GAHTRDEDCQRVIFGIDELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRLENR
FYRRMSSLMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLYHKVK
TELSSGEDETAEVDMDSDTPGTSTGQQQANPSPKKRGVVLDVRAWRGQCRELLRRMMDGP
DSEPFRQPVDLFTYQDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNSKAYT
PNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRKSRQSVSYRKRLHSGGSSLATS
QPSSPKGKHKSRKKPTPKELQTSSKKRSRRPSQASETSSVMVDEDSQPSSSSNSGTGSHS
GGPGADRVTRSQTTPVKNSEGNRPLTNGTRQSHRRRVLQEDEGEGSGGSNSSSSSSSSSS
SSSSSSSSSSDSESDNESEVGKFVDGGDHDYSKAPRLKMGLKGKLAVSGKRMLEEEEAPE
RAKRARVQAEEQEEEDEDEQGEDEEEEGEQPPQQEEGRAPEDEEEEPEDEDEPEEKEESE
EEEDSEQGEGGAEGGQKSRSRSKSGQVNTRNQGRRTVLYNDESDDESGTTEDPLNLGMSR
SGRVRRMTEKARVSHLMGWNH
NT seq 5286 nt   +upstreamnt  +downstreamnt
atggcagaagaacagtgttcagaaatcgaagctgaattgtattacctcattgctagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatactggttgaggaactagaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatccctgcagactacctgctgagagtatgccagcagata
ggtcctctcatagacaaggaggccccacctagtgtccctgggatccaaaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctccaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtttccatcatgggtgctcgccaggctactggcactgcccgctttggc
catgctctgccatcctacacctatcagcatgtgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggctttcgaccgcagtggcagacggatatttacaggttct
gatgactgtctggtaaagatatggtccacagatgatggccggctgctgtccaccctgcgt
ggccacgcggccgagatctccgacatggcagtgaactacgacaacacgctaatcgcctca
gccagctgtgacaaggtcatcagagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacgtccatacagttttgtccggcggttaaaggacca
atgcggtacctggcctccaccggagcagacggcatggtgtgtttctggcaatggcactcg
ctcagcatgaagttcgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacaggcagcacggat
catgtaatcagggtgtattaccttggctctgaaacacccatgaagctctctgagttggac
tctcacatggacaaagttgtggtggtccagttttgtaacaacagttacagcctgaggttt
gtgagtggtagtcgtgacggcacagtcaggatatggcattaccagcagcaggagtggaag
agcattactctggacatagccactagactgccagggactgctgttgtgaatggcgaggac
aagaccaagctggtgccgacaatggtggcctgggaccgtggtgaccgcacggttgtcaca
gccgtctctaactacctgctcaaagtctggagctccaccacgggccagcttctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcctggaggcccacccctttgaccaccgcatc
atgctctctgccggccacgacggcaacatctacatgtgggacctctccaagggatccaag
atccgcaacttcttcaacatgattgagggccaaggtcacggagctgtatttgactgtaag
ttctcagctgatggacaacattttgcctgcactgactcccatggccacctgctcatcttt
ggctttggctgcagcagaccctatgagaagattcctgaccaaatgttcttccacactgac
ttcaggccgctaatccgagacgccaataactttgtcctggacgagcagacccagcaggcg
ccccaccttatgccccctcccttccttgtggatgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggatgagcatctggtgccccagctt
ggctacatggcgaatggtgatggtgaggtggtggagcaggtgatcggccagcaaacggca
gaggagggtcacggagaaagccctttggatgtcctgatcagacagttgcaggaccaaccg
gatgagaggcgggaccaagatggagtgcctgaaggagagggtgctgttgagggagcagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
caaatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggtggttgtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
aggcgggcaaaaggtgaggtggagtgttccctctacaacacagagaggaggaggaaacct
gtactcagtgctactaagactgaggagcaggctccatgcaagcgctccctgcggcgaacc
cagaggaagaagaccagacctgcaccagcgtaccagacccgctcagcacgagatcgccgc
cctgtggataggcggaggaactctgacagccagatggactcagacagcgatggagaggca
gaggagcaggcagaggccagtgatgcttcctctgatggggaagcacagtggcagagtgac
agcagttccagtgtctcctccagtgactactctgattggacagctgatgcggggatcaac
ctccagccccccaagcgtaccagcagaaggcaggtgcggccgcctgttggctccagcagc
tcggaggaggcggagggccagggagaggaggccaggaggaagcaggcggaggagaagaag
aagcccaagcagaccaaacagaagaaacccagttcgtctctgtctctggctggctgtgat
gcagaggaatggcttcccccgtcctggatcatggagaccatcccccgacgctcgcctttt
gtgccacagatgggtgatgagctgatgtacttcaggcagggccaccaggcctatgtcagg
gcggtgcgcagggccaaagcctacagcatcaaccctcagaaacagtcctggaacaagctt
aacctcagggaccaggagtctgtgaaggtagttggtatcaagtatgaagtgggccccccc
accctctgttgtctaaaactggccttcctgcaccccatctcaggcaaaatgaccaatgag
tcgttctccctaaagtaccatgacatgccagatgtcattgatttcctagtgcttcagcag
ttctatgaygaagctaaagagcacaactggcagacaggtatgcgcttccggagcatcatc
gatgacgcctggtggtttggctcagtggaggaccatcagccactccagccagagtaccca
gacagcctgttccagtgctacactgtcaagtgggataatagcgagagggagaagatgagc
ccttgggacatggagcccattcctgatgaagcggagttgccagaggatgttggtgacggg
gtggtggtgacggaggaggaggtgaaggctcgcctctacagcccccaggagggggagtgg
ggggctcacacacgggacgaggactgccagagggtcatctttggcatcgacgagctgctc
acactggacttggccaaggcatttgcatcaccagtggacctgcgggactaccctctctac
tgcactgtagtggcctaccccactgacctcagcaccatccgcagacggctggagaaccgc
ttctacaggcgtatgtcatcgctgatgtgggaggtgcgctacatcgagcacaacgcccgt
actttcaacgagccccagagccccatcgtggcagcagccaaggtggtgactgacgtgctc
ctccgctacatcggggaccaaagctgcacagacatcttagatctgtaccacaaggtgaag
acggagctgagcagtggagaggatgagactgctgaggtggacatggactctgacactcca
gggacctccacaggacaacagcaggccaatcccagtcctaagaagcgtggggtggtgtta
gatgtgcgtgcttggcggggccagtgtcgggaactgctgcggcgtatgatggacggccct
gactctgaacccttcagacagcctgtggacctcttcacctaccaagactatcgagacatc
atagacactcccatggacctggggactgttacagaggcgctggtcgtcggaaactacgag
aaccccatggagtttgccaaagatgtccgcctcattttcagcaactccaaggcctacacg
cccaacaagaagtcacagatctacaccatgaccctaagcctatcagccttctttgaaaga
caaatcatctccatcatctcggattacaaatctgcagtccagaaccagcggaggaagagt
cgccagagtgtcagctacaggaagagactgcacagcggaggcagctcccttgccaccagc
caaccctccagtcctaaagggaagcacaagtcaaggaagaaaccaacaccaaaagaatta
cagacctcatccaagaagcgttctcgcaggccatctcaagcgtcagagacgagcagcgtg
atggtggatgaggacagccaaccctcatcatcgtctaactcagggacaggaagccacagt
gggggtccaggggccgaccgtgtcacccgcagccaaaccactcccgtcaagaactcagag
ggtaacagacctctcactaacggcaccagacagagccacaggagacgagtgctgcaggag
gatgagggagagggatctggaggatccaatagctcatcttcgtcatcgtcttcctcgtct
tcctcatcatcctcctcctcctcctcatcagacagtgagtcggacaatgagtcggaggtt
ggaaagtttgtggacgggggagatcacgactacagcaaagctccccgcttaaaaatgggc
ctcaagggcaagttggccgtctctgggaagaggatgctggaagaagaggaggctccagaa
agagccaagagagcacgagtccaggcagaggagcaggaagaggaggatgaagacgaacaa
ggtgaagacgaggaggaagagggggaacagccaccgcagcaagaggaagggagggcgcct
gaggacgaagaggaggagcctgaggacgaagatgagcctgaggaaaaggaggaatcagaa
gaggaggaggactcagagcagggtgagggtggggcagagggcggtcagaaaagcaggagc
cgcagtaagtctggtcaggtgaacactcggaaccagggccgcaggacagtgttgtacaac
gatgagtcagacgacgagtcagggaccacagaggacccactcaacctaggcatgtcccgc
tcaggacgggtacgccgcatgaccgaaaaggcccgggtcagccaccttatgggctggaac
cactga

DBGET integrated database retrieval system