Salvelinus sp. IW2-2015 (Arctic char): 111950458
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Entry
111950458 CDS
T05762
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111950458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111950458
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
111950458
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
111950458
NCBI-ProteinID:
XP_023823823
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Position
LG23:complement(12352996..12366234)
Genome browser
AA seq
1892 aa
AA seq
DB search
MAASAASAGSTPGFCPSYAVICSFLERYGTLLDLPELTFPQLERYLQDTISVPKILVDLH
VKLLRKIGKSVSADRWEKYLVKVCHEFNSTWAWELENKGYKDMSVECKTGILKHLCECQF
DDNVKFKTAINEEDPDKMRLLPIGKDKDGLMYWFQLDQDKNVRVYVEEQDDLDGSSWNCI
VRDRNSLAEILALLKTQIDPALLTKKEGEEEEKNNTGGEVKKTEDTSEDEEDKPSKGTAS
LVSPKTEITEKEESKLDESDAKSSLNGLKDESESKRQSEEPMVDDKVTINTQAIKEEPME
VSESKESTATNATEPLAEKPCLTPQTDEAKRKTANELQRAMKNDQQAKIPLKKREMKLCE
NVDNNSGGGSSIYVRNPSVTPVKESPEVEETSKEVSDAPVGMCKSDQMNGDAWPTTEKSV
NNGLRDSADGKKRQTKAAAGEERKAAEASAKEKVNLAKEKEEMASNTEVAMANETSLQKM
VPAEKESTEDSEEVKKSALKDAKSLSPLMTKPLTSSKDATSPPEKHADCKEEQKVKVSKW
DVKVCRTEHTTYTSIETDKNPLSSKLQKPDETNGTDSSITSQEVKSAVSKETDKTVVNKD
GYPLSVVKDMEKPPSTKGTEKWSNPKNPETSVITKQTGRPDPITEKPDRSKCIKMPTVIK
NTEKPPDKEGVEKYDVSKDIKTSVIKKTEISEKSKDAENLAISQETNKSSFLKKADKPVS
NKEAEKLESTKETDKSLVIKMTVKPGASKHTEKCDNPKDIKMSAVTKEKPAVGTDAKAAA
EVKKKAVLEKDVFSASICKDEMRTVAKATKTQSGPKYVEMADVSEKTTQSQLDEPIKVEK
SATPKDAEKCATPKDTEKSTKLVTPKEGGKLATPKDTEKSAIPKDTVKYAQSAAPKDAEK
LANPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTP
KDAEKSAKNTETTSKKIEQSFRGQKPETEKLADTKTVAEKGEKLATFQDAKQLPSLKKSV
PVEGKQEEPMEMRSEKSTHDNIKIKGHAEKGWPKKAVKSGVKSETKPIKDPKPMDCDTPS
EKQAVSKKASSLTETEGETDKSQDKVIKEDSTTQGCPQKEDGSKDDQAKKNDKKEDDGTE
KDVKNSTVAEKSGQAKASEGSEEDENKNKEDEDKSEKKDAGTTSEIQEEGIRLKIRGITH
RRRAELQRKERDSGSDTGETGRSLRRSPRICRPTAKGVEFQDRRMEKKEATPPVEKGDEE
EKTVQRKPREKVDQDGLYKSKGRRRRKTRWSNTRTQRRKNNGSGEDDESESSEEESEEDN
SDESFKVERGKRRKRNRERHSDDSDTSSDDDLPPNDDPCKHCGLPNHPELILLCDSCDSG
YHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLTDLDASLKKRERAERRKERLVYVG
ISVENIITPSLAIEEEREEEVVKKEKKERTKSWGRRSTRAKKSISYRFDEFDEAIEEAIE
EDIREADGGGAGRGKDMANITGHSRGKDMSTILAAGEGGEGKENGCPPRPNAGQRRKKRR
RLNDLDSDSTMEEEESEDEFRLSDSTEEEEFVASDKSNAESEVAVDSNDDSDFGSTQRRT
ARTRRPAKRQRSTQPRRRRRPRRYSDDEEETSEEEEEEMVSEGSSEFSDSDLDCSRRRSR
RSQTTKQVNYCESSGDSDGSKANTNRDKVKPWRRLASSDSEASSSRGSDDSERERTRLKR
RADSSEKESQQHRRRLSLKRRRASEEDDDDHDSDESSEGERPVRKRVNRIDSDDSDKEEK
ETKETREEEEGGVLGKGASPLDYSLVELHPPTNGQSPIKALEGLAHIGPQKPVATAVAIA
PNGLELAPQDDDEDDLLGVTDLVDFVCNSDML
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcatcggcgggttctacccccggtttttgcccaagctacgccgtg
atatgctcttttctagagcggtatggaaccttgcttgatttaccggagcttacatttcca
cagttggagcgatatctccaagacacaatctcagttccaaagatcttggtggaccttcac
gtgaagttgttgaggaagattggcaagtcagtgtccgcagacagatgggagaagtacctt
gtgaaggtgtgccatgagttcaacagtacttgggcatgggagcttgaaaataaaggatac
aaggacatgtctgtggagtgcaagactggaatcctcaaacatttgtgtgaatgccagttt
gatgacaatgtaaagttcaagacagcaatcaatgaggaggatcccgataagatgcggctt
ctccccattggcaaggacaaagatggcctgatgtactggttccaacttgaccaggacaag
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcttcctggaactgcatt
gtcagagacagaaacagcttggctgagatcctggcactgctaaagactcaaatcgaccca
gcactgttgacaaagaaagaaggagaggaggaagaaaaaaataatactgggggagaagtt
aaaaagacagaggatacctcagaggatgaagaggacaaaccctccaagggtacagcttcc
ttagtctccccaaaaaccgagattacagaaaaagaggaatcaaaactagacgaatcagat
gccaaatcctcattgaatggcctcaaagacgagtcagagtcaaaaagacagtcagaggag
cctatggtggatgacaaggtcaccataaacacccaggccatcaaagaagagccaatggag
gtgtcagaatccaaggagagcacagccacaaatgctacagagcctcttgcagagaaacct
tgtctgacgccacagacagatgaagccaagaggaagactgcaaatgaactccaaagggcg
atgaagaatgaccagcaggccaaaatcccattgaaaaagagagagatgaaactttgtgaa
aatgttgataataatagtggcggtggcagtagtatctatgtgcgaaacccatctgttact
cctgtcaaagaatctcctgaagttgaggagacaagtaaagaggtctctgatgccccggtg
gggatgtgtaaaagtgatcaaatgaatggtgatgcttggcctacaacagaaaaaagtgtc
aataatggtttgagagactctgctgatggcaaaaaacggcaaacaaaagctgctgctggg
gaagaacgtaaagcagcagaagctagtgcaaaggagaaagtaaacctggccaaagagaaa
gaggagatggcaagcaacactgaggtggccatggccaatgaaacaagtctacagaaaatg
gttccagcagaaaaggaaagcactgaagattcagaggaagtaaaaaaatcagccttaaaa
gacgctaaatctctgtcccctctaatgacaaagccattgacttcatctaaggatgcaaca
agcccaccggagaagcacgctgattgtaaagaggaacaaaaagtgaaggtatccaagtgg
gatgtaaaagtgtgtcgtacagaacacacaacctatacatcaatagaaactgataaaaac
cctttgtctagtaagttacagaaaccagatgaaactaacggaacagattcatccattacc
tctcaagaggtcaagtcagctgtctctaaggaaacagataaaacagttgtcaataaggac
ggttatcccctttctgtcgtgaaagatatggaaaaaccacccagcacaaaaggtacagaa
aagtggtcaaaccctaaaaacccagaaacctcagtcatcactaaacaaaccgggagacct
gacccaattacagagaaaccagaccgctctaaatgcataaagatgccaacagtcataaaa
aatacagagaaaccacctgacaaagagggtgtagagaaatatgatgtttctaaagatatc
aaaacttctgtaattaaaaagacagagatttcagaaaagagtaaagatgctgagaacctg
gccatctctcaagagaccaataagtcctcattccttaaaaaggcagacaaaccagtttcc
aataaagaagcagagaaactggagagcactaaagagactgataaatcgttggtcattaaa
atgacagtgaaaccaggggcatctaaacatacagagaaatgtgataaccctaaagacatt
aaaatgtcagctgtcaccaaggagaaacctgctgtaggcacagatgcaaaggctgccgct
gaggtgaagaaaaaagctgtcctggagaaagacgttttctcagcgtctatctgtaaagat
gaaatgagaactgttgctaaagcgactaagacacaatctggaccaaaatacgtggagatg
gcagacgtctctgagaaaacaacccaatcacaactggatgaacccataaaggtagagaaa
tcggctacccctaaagatgcagagaaatgtgctacccctaaagacacagagaaatctact
aaattggttacccctaaggaaggtgggaaattggctaccccaaaagacacagagaaatca
gcaatacctaaagacacagtgaaatatgctcaatcggcagcgcctaaagacgcagagaaa
ttggctaaccctaaagatgctgagaagtctgctaaatcagctacacctacccctaaagat
gctgagaaatcggctaaatcagctacacctacccctaaagatgctgagaagtctgctaaa
tcagctacacctacccctaaagatgctgagaagtctgctaaatcagctacacctacccct
aaagatgctgagaaatcggctaaaaacacagagactacctctaaaaagatagaacaatct
tttaggggacagaaaccagaaactgagaaactggcagacacaaagacagttgcagaaaaa
ggagagaaacttgccacctttcaggacgccaagcaattaccctctctcaaaaagtctgtc
ccagtggaggggaaacaggaggagcctatggaaatgcgttcggaaaagtcaacacacgac
aacataaagatcaagggacatgctgaaaaaggctggccaaaaaaggctgttaaaagtgga
gtgaagtctgagaccaagcctatcaaagacccaaagcccatggactgtgatacaccatca
gaaaaacaggctgttagtaagaaggcatcatctctcacagagactgagggtgagacggac
aaaagccaggacaaagtcatcaaggaagattccacaacacagggatgcccccaaaaagag
gatgggagtaaggatgatcaggctaagaaaaatgacaaaaaggaggatgatggaactgag
aaagatgtcaaaaattcaacggtagcagagaaatcgggtcaggcaaaagcaagtgagggg
tctgaggaagatgagaacaagaacaaagaggatgaggacaagagtgaaaaaaaggatgcg
ggaacaacatcagagatccaagaggaggggattcgcctgaaaatacgcgggattacccac
cggaggagagctgagctccagaggaaggagagggactctgggtcagatactggtgagact
gggagatccctgaggaggtcacccaggatctgcaggccgaccgctaagggggtggagttc
caggacaggaggatggagaagaaagaggccacaccccctgtagagaagggtgatgaggag
gagaaaactgttcagaggaaaccgagagagaaggttgatcaagatggactgtacaaatct
aaggggcgacggaggagaaagacccggtggtccaacactcgaacacaaaggcgcaaaaat
aatggttctggtgaagacgatgaaagcgagtcgagcgaagaggagagcgaggaggacaac
agtgatgagagctttaaggtggagaggggcaagaggaggaagaggaacagggagaggcac
agcgacgactctgacacctcctcggatgatgacctccctcctaacgatgacccctgcaaa
cactgcggcctccccaaccatcctgagctgattttgctgtgtgactcgtgcgatagcggc
taccacacggcctgcctcagaccccctctcatgatcatcccagacggggagtggttctgt
ccaccctgccaacataagctgctctgtgacaagcttgaggagcagcttactgatctcgat
gcttccctgaaaaagagggagcgcgctgagcgacgaaaagagcggttggtctatgttgga
atcagtgttgaaaacatcatcactccctcgttggcgatagaggaagaaagggaggaagag
gtggtgaaaaaggagaagaaagagcgaaccaagagctggggtcgaaggtcgacaagggca
aagaaaagcataagctacaggtttgatgaatttgatgaggctattgaggaggcaattgaa
gaagacatcagagaggctgatggtggaggagctggtcgaggcaaggacatggccaacatc
acaggccatagcagagggaaggacatgtccactatcctggcagcaggagagggtggcgag
ggcaaggagaatgggtgcccgccgcggcccaacgccggccagcgcaggaagaagcgccgg
cgtctcaacgacctggacagcgacagcactatggaggaggaagagagcgaggacgagttc
cgtctcagtgacagtacggaggaagaggagtttgtggcgtcagacaagagcaatgcagag
agcgaagtggcagtcgactccaatgacgacagcgacttcggcagcacacaacgcagaact
gccaggacaaggaggccggccaaacgtcagaggagcactcagccgcgacggcgccgcaga
ccacgaaggtactcagacgatgaagaggagactagtgaggaagaagaggaagaaatggtg
tcggagggctccagcgagttcagcgatagtgacctggactgtagccgacgccgatcccgc
cggagtcagacgacgaagcaggtcaactactgcgagtcgtccggagactctgacggctct
aaggccaacacaaaccgcgacaaagtcaaaccgtggcggcgcctcgccagttctgacagc
gaagcgagctcctccagaggctcggacgacagcgagagggagaggactaggttaaagagg
agggccgactcatccgagaaagagtcccagcagcaccgcagacgactttcactgaaacgg
cggcgagcctctgaggaggacgatgacgaccacgattccgatgaatcatcggagggagaa
cgtcctgtccgcaagcgtgtgaaccgcatcgactcggacgactctgacaaggaggagaag
gagacgaaagaaaccagggaagaggaggaagggggggtgctggggaagggagccagcccg
ttggactacagcctggtggagctgcatccccccaccaacggacagagtcccatcaaggcc
ctagagggcctggctcacattgggccccaaaaacctgtggccacagctgtcgccatagcg
cccaatggactggagttggcaccacaggatgatgatgaggatgacctgctgggggtcaca
gacctggtggactttgtctgcaacagtgatatgttgtaa
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integrated database retrieval system