Salvelinus sp. IW2-2015 (Arctic char): 111950523
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Entry
111950523 CDS
T05762
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111950523
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111950523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111950523
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111950523
Intermediate filaments
Intermediate filament-binding proteins
111950523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
111950523
NCBI-ProteinID:
XP_023823918
LinkDB
All DBs
Position
LG23:25249293..25278354
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AA seq
1549 aa
AA seq
DB search
MSNSSETFAFSGAQETWEGQELIDEKPELRSVVQQKLEEIRECWTDLESTTKAKARALFE
NNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHLPTFNEQLHNFQSQMGNLYKDVGELGS
LQGVCLPQRGSLVKGGEGEGGEQPAVVETRIVRLIEPLKERRRILLASKEMHQVAQDLEE
EILWIQERLPLASSKDYGNNLQSVQQHVKINQTLQRDLQGRQARVEEVLDRAGIIASLRT
PEVDFVREGAGHVRQVWEVLRLEAERRSVMLDVVLQAQQYYSEAAKVESWLAGQKLHLIN
EEKGTDEESTLQLLKEHLALEATLENYAETVGMLSQQCQRQLELGHPDSEGITKQQSHID
RLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELEKWITEREAVASSTELGQDLEHVTMLQ
EKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHTDAATIAEWKDGLNESWADLLELMETR
RQMLAASHQLHKFFTDCKEVLAQTAGKMRQLPEVRACQASIANPATLQRLMLSFEHALQL
LVSQVRQLQENAAQLRTIYAGEKAEAIMSKEQEVMSAWKELLVSCEASRVQVTSVTDKVQ
FFSVVREQLMWMEGIMGQIGGDDPRDSSSAEVMMKQHGELKAKMDGRRKTIQQCVELGKI
LLAAGNPASEEIKEKLDALLAKQKDLSERWDKQQEKLQRKKDQFQYAQETVKAEAWLKAK
EPLISSSSSSRVAGGAGGDAQAQTDEVEQLILRHEAFRNAAATWKERFSSLRQLSNAEKL
REEQSSKPSPMPLSSRRMFPSSCLTPTVPLATSTLLRQTVQVHIEPRPKZTSLEMSASAS
SAAQRLGSTIASYAPVINGSGYHGLDHQSSSGGLESSNYPGLNHPGGGGVDSSSSYLGGN
HQTGPPPVDSSGYLGLNHQSSGGMVSPGYLPQNQSSGGMCGPGYLPQNQSSGCMGSPGYL
PQNQSSGGMGSPGYLPQNLSSGGMGSPGYLPQNQSSGGMGSPGYLPQNQSSGGMGSPGYL
PQNQSSGGMGSSGYLPQNQSSGGMGSSGYLAQNQNSVGIGSSGYLGQNQSSGGMGSTGYL
AQHQGSGSMGSSGYLAQSVGGMGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHMQK
AVNPLLEASRAQREQFGDIPMVDMIGPESGLDLLHGRLQRDPRGSRSDPQMDHLRREREY
KLGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPRQDDSSDMEGS
DKRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRRRPR
PKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGHQKSPSSKSWVNLYCVLS
KGGITFYKDAKSTTTPYNEETPLDLSVCICDSTIGYKKKKNVFVIKKNDGNDYIFHAKDE
EDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGGEVE
EEERSEKERSEKGEGSKKTGEGSEKADTSETGERAEGGAGGSSTSGKSK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactcgtctgagacctttgcattctctggcgcacaggagacctgggagggccag
gagctgatcgatgagaagcctgagctgcgttcggtggtgcagcagaagctggaggagatc
agggagtgctggacggacctggagagcaccaccaaggccaaggcccgggctctgtttgag
aacaacaagccagagccggtggtgaagagctactcagacctggaccaccagctctctggc
ctggagaaacagcccccccagctggagcaggctcatcacctacccacattcaacgagcag
ctgcataactttcagtctcagatggggaacttgtacaaggacgttggggaactagggtcc
ctccagggggtgtgcctcccccagcgaggcagcctggtgaagggtggggagggagaaggg
ggcgagcagccagccgtagtggagacccgcatcgtgcgcctcatcgagcccctgaaggag
aggcgacgcatcctgctggcctccaaagagatgcaccaggtcgcccaggacctggaggaa
gagatactgtggatccaggagcggcttcctctggcctcctctaaggattacggcaacaac
ctgcagagtgttcagcagcatgtcaagatcaaccagacactgcagagggatctgcagggg
cgccaagcacgggtggaggaggtgttggaccgagcggggatcatcgcctctctgcggacc
cctgaggttgactttgtgcgtgagggggcggggcatgtgcgtcaggtgtgggaggtgctg
aggctggaggcggagaggaggtctgtgatgctggatgtggtgctgcaggcccagcagtac
tacagcgaggcagccaaggtggagtcctggctggcaggccagaaactgcacctcatcaat
gaggagaagggcacggacgaggagagcaccctgcagctgctgaaggagcacctggccttg
gaggcgacactggagaactacgctgagacagtgggcatgctctcccagcagtgtcagcga
cagctggagcttgggcacccagacagtgaggggatcaccaagcagcagtcccacatagac
cgtctgtatgtgtctctgaaggacatggtggagcacaggaagaccaagctggagcagcag
tactggatgtaccagctcaacagagaggtggaggagttagagaagtggatcactgagagg
gaggccgttgccagctccactgagctgggtcaagacctggagcatgtcacgatgctacag
gaaaaattcaccaagttctgctcagagaccaacagcataggccagcagaggatggagcag
gtgaataagatggtgaatgagatgatagactgtggccacacggacgcggccaccatagct
gagtggaaggacggactgaacgagtcatgggccgacctactggagctcatggagacccga
agacagatgctggcagcatcacaccagctgcacaagttcttcaccgactgcaaagaggtc
ttggctcagactgcggggaagatgaggcagttgccagaggtgagggcgtgccaagccagc
atcgccaaccctgccaccctgcagaggctcatgctctccttcgagcacgccctccagctg
ctcgtctcacaggtaaggcagctgcaggaaaatgcggcccagctgaggaccatctatgcc
ggagagaaggctgaggccatcatgagcaaagagcaggaagtgatgtcagcatggaaggag
ttactggtttcctgtgaggccagtcgtgtgcaggtcacctcggtgacagacaaggtgcag
ttcttctcggtggtgcgcgagcagctcatgtggatggagggcatcatgggacagattgga
ggggacgaccccagggactcgtcttctgcagaggtgatgatgaaacagcatggtgagctg
aaagccaagatggatggccgtaggaagacaatacagcaatgtgtggagctgggaaagatc
ctgctggccgcaggcaacccagcctccgaggagataaaggagaagttggatgcgctcctg
gctaagcagaaggatctctctgagagatgggacaaacagcaggagaagctgcagcgcaag
aaggatcagttccagtatgcccaggagacggtgaaggcggaggcctggctgaaggccaag
gagcccctgattagctccagctcctcctctagggtggctgggggggctggaggagatgcc
caggcccagactgatgaggtggagcaactcatcctccgccacgaggccttccgcaatgct
gcagccacctggaaggagcgcttcagctcactgagacagctctccaatgcagagaagctg
agagaagaacagagcagcaagccttccccaatgccactctccagtcggaggatgttccca
tcatcctgtctcactccgaccgttcctcttgctacctcaactctgctgagacagacggtc
caggtgcatattgagcccaggcccaagsagaccagtctggagatgtctgcctctgcctcc
tctgcagcccaaaggttgggttctaccatagccagctacgctcctgtcataaatggctct
ggttaccatggactggaccatcagagcagcagcgggggattggagagttccaactaccct
ggactgaaccatccgggcggtggaggagtggacagcagctctagttaccttggagggaac
catcagactggccccccgccagtggatagttctggctaccttggactgaaccatcaaagc
agtgggggtatggttagtccaggctacctacctcaaaaccaaagtagtgggggtatgtgt
ggtccaggctacctacctcaaaatcaaagcagtgggtgtatgggtagtccaggctacctg
ccgcaaaatcaaagtagtgggggtatgggtagtccaggctacctgccacaaaatctaagt
agtgggggtatgggtagtccaggctacctgccgcaaaatcaaagtagtgggggtatgggt
agtccaggctacctgcctcaaaatcaaagtagtggaggtatgggtagtccaggctacctg
cctcaaaatcaaagtagtgggggtatgggtagttcaggctacttgccgcaaaatcaaagt
agtgggggtatgggtagctcaggctaccttgcacaaaatcaaaacagtgttggtattggt
agctcaggctaccttgggcaaaatcaaagtagtgggggtatgggaagtactggctacctt
gcacaacaccaaggtagtgggagtatgggtagttcaggctaccttgcgcaaagtgttggg
ggtatgggtagttctagctatctgcctcaaagtggtggggtcatggaccccaaaatggca
tatgcgtggcagcatctgaaagctgactgcatgcagcccaggatcaaccacatgcaaaaa
gctgtcaaccccctcctggaggccagcagggcgcagagggaacagtttggggacatcccc
atggtggatatgatcgggccagagtctggcctggatctcctccacggcaggctccagagg
gacccccgcggcagccgctcagacccccagatggaccacctgcggcgggagagggagtac
aagctaggtcggcagacctccagcgaacaggagattcaggcgcggctcaacgagctgcca
atgattgtgcgccaggagcgctataggcgacgcctggagaggcagtcgtccagcgagcag
gagggcagtgggaaggcgaggacaccgaggcaggacgactccagcgacatggaaggctcc
gacaagcgctcaacagagaagagagccaccaccatggctgagattgtggagcaggcccag
gagagagaggcagcacaagctcgaggggagacgtaccgccccaccagcagcctctcagca
cctgtgacctacgagcgcccgcgcgcccgagaccgtcccaaaccccgcaggagaccccgt
cccaaagagcctgaggagaagcgacgctctcgctcggctccggcccagagtccggcacaa
cttctgccgccctcacacactgcccataacgaaggcttcctgtaccgcaaacacgacttt
gagggccaccagaagagtcccagcagtaagtcctgggtgaatttgtattgcgtgttgtca
aagggagggatcactttctacaaggacgccaagagcaccaccacaccttacaatgaagaa
accccactcgacctgagcgtctgtatatgtgatagcaccataggatacaagaagaagaaa
aatgtcttcgttatcaagaaaaatgatggcaatgactatattttccatgcaaaggatgag
gaggacctgaaggcttgggtcactaacatcaccaccagtataactgaacacgaggagatt
gccaagtgggacaagcccaccacctcgtccacagatcccgaccgctcggagaggaaggag
aagtctgagggcgacgcagacgccaggtcagagaggtctgagatgggaggagaggtggag
gaggaggagaggtcagagaaagagaggtctgagaagggagaggggtccaagaagacggga
gaaggctcagagaaagcagacacgtcggagacgggtgagagggcagagggaggggcaggg
ggctccagcacgtcagggaagagcaaatga
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integrated database retrieval system
