Salvelinus sp. IW2-2015 (Arctic char): 111950614
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Entry
111950614 CDS
T05762
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111950614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111950614
03036 Chromosome and associated proteins [BR:
salp03036
]
111950614
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111950614
Coactivators
SAGA/TFTC/STAGA complex
111950614
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111950614
STAGA complex
111950614
TFTC complex
111950614
SAGA complex
111950614
SLIK complex
111950614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
TFIID-31kDa
CENP-S
Motif
Other DBs
NCBI-GeneID:
111950614
NCBI-ProteinID:
XP_023824108
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All DBs
Position
LG23:49496998..49567373
Genome browser
AA seq
634 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSDEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEENEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKTESTEPLKAVKPGQEEEGSIQK
GQGATSAEAKGKKDGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKVVSDGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNVEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGASSTQ
QVITRTSSSVTSTVASATSTLQPLVKLESGGPGGLGGSRPLQKYIVVSLPSSSSLESKSG
VLPPSSSSASPILLEAGMKMDCSDSPGASTQSPR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccacggagtcaatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gatgaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagatgtaaactgacgaccagcgacatagatcacgctcttaaactgaagaatgta
gagcctctctatggcttccagtcgcaggaattcatcccgttccgcttcgccagtggagga
gggagagagcttcacttctacgaggagaatgaggtggacctcagtgacatcatcaacaca
cccctccctagagtcccccttgacgtttctctcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaagactgaa
tctacagagcctctcaaagcggtcaagcctggtcaggaggaggagggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggatggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacggag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtatcgccacagac
cccgggctctaccagatgcttcccagattcagcacttttatttctgaaggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccacgctctacctagagaaatatctgcacgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgacaagactcag
tggacgacacgctacggatgtatcgctggactgtctgaactaggacctgacgtgatcaaa
acgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagtagtgtctgatgga
cctgttgtctccaacattgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgtcatcgctaaaacccgtcccctgcctgacaacgtggagcagtaccgg
gcagactacggttaccttgggcccatgctgtgttctcatgtggtcaaggccagggcccag
gcagcactacaggcccagcaggtcaacagaaccacactcaccatcacacagcctcggccc
accctaactgtgtctcagagcggaataggagggtcaggggggtcccgtacccccagcatc
atcaaggtacccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgcccccggcaaccaagtacatcgtcatggcaaccagctcaggggcatcttccacccag
caggtgatcactcggacttcctcctcagtgaccagcacggtcgccagcgctacctccacg
ctgcagcctctggtcaagctggagtctggagggcccggcggcctgggggggtcacgaccc
ctccagaagtacattgtggtgtccctcccctcatcctcctctctggaaagtaagagtggc
gtgctccctccctcttcttcttccgcctcccccattttactggaagccgggatgaagatg
gattgctcagactcccctggcgccagcacacagtccccgcgctga
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