Salvelinus sp. IW2-2015 (Arctic char): 111950614
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Entry
111950614 CDS
T05762
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111950614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111950614
03036 Chromosome and associated proteins [BR:
salp03036
]
111950614
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111950614
Coactivators
SAGA/TFTC/STAGA complex
111950614
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111950614
STAGA complex
111950614
TFTC complex
111950614
SAGA complex
111950614
SLIK complex
111950614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
TFIID-31kDa
CENP-S
Motif
Other DBs
NCBI-GeneID:
111950614
NCBI-ProteinID:
XP_023824108
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All DBs
Position
LG23:49496998..49567373
Genome browser
AA seq
634 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSDEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEENEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKTESTEPLKAVKPGQEEEGSIQK
GQGATSAEAKGKKDGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKVVSDGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNVEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGASSTQ
QVITRTSSSVTSTVASATSTLQPLVKLESGGPGGLGGSRPLQKYIVVSLPSSSSLESKSG
VLPPSSSSASPILLEAGMKMDCSDSPGASTQSPR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccacggagtcaatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gatgaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagatgtaaactgacgaccagcgacatagatcacgctcttaaactgaagaatgta
gagcctctctatggcttccagtcgcaggaattcatcccgttccgcttcgccagtggagga
gggagagagcttcacttctacgaggagaatgaggtggacctcagtgacatcatcaacaca
cccctccctagagtcccccttgacgtttctctcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaagactgaa
tctacagagcctctcaaagcggtcaagcctggtcaggaggaggagggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggatggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacggag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtatcgccacagac
cccgggctctaccagatgcttcccagattcagcacttttatttctgaaggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccacgctctacctagagaaatatctgcacgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgacaagactcag
tggacgacacgctacggatgtatcgctggactgtctgaactaggacctgacgtgatcaaa
acgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagtagtgtctgatgga
cctgttgtctccaacattgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgtcatcgctaaaacccgtcccctgcctgacaacgtggagcagtaccgg
gcagactacggttaccttgggcccatgctgtgttctcatgtggtcaaggccagggcccag
gcagcactacaggcccagcaggtcaacagaaccacactcaccatcacacagcctcggccc
accctaactgtgtctcagagcggaataggagggtcaggggggtcccgtacccccagcatc
atcaaggtacccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgcccccggcaaccaagtacatcgtcatggcaaccagctcaggggcatcttccacccag
caggtgatcactcggacttcctcctcagtgaccagcacggtcgccagcgctacctccacg
ctgcagcctctggtcaagctggagtctggagggcccggcggcctgggggggtcacgaccc
ctccagaagtacattgtggtgtccctcccctcatcctcctctctggaaagtaagagtggc
gtgctccctccctcttcttcttccgcctcccccattttactggaagccgggatgaagatg
gattgctcagactcccctggcgccagcacacagtccccgcgctga
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