Salvelinus sp. IW2-2015 (Arctic char): 111950630
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Entry
111950630 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: vitronectin-like
KO
K06251
vitronectin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111950630
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111950630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111950630
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111950630
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111950630
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111950630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
111950630
NCBI-ProteinID:
XP_023824140
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Position
LG23:complement(47526802..47549376)
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AA seq
467 aa
AA seq
DB search
MKLAVVLLALTLASAFAAEESCVGRCHSFNPMTKCQCDSMCRYYSSCCMDFDSACPRKIA
RGDTFDAPEDDVVNTPTTAVNTNPGTMADPETTNIPPVMNTTAVPTTTLAPTTTTHTPTL
PPDPEAVPCSGKPFDAFLQLKNGSIYAFRGDYFFELDERAVVPGHPKLIYDKWGIRGPID
AAFTRINCQGKTYIFKGKKYWRFEDDVLDADYPRDISVGFEKVPTDVDAAFAIPAPGHHG
KEKVYFFKGDQYYQYEFKHQPSHEECVRLTKSSPSVLFTRYTNLYCDDTWENLFTMLFQG
LHGHKKGPRFINKDWVGSSPHRCCHGGRLYISPKPTPSPXPTPRRRANRWRXDRRRGQRG
RARQSRSAYLEDFFLEDDWMGGGFTYXYDYSDYTPTQTTHDKTLPVQNVYFFKKDKYYRV
DLQTKRIDFASPPYPRSIAKYWLGCKQESGPGREEIDSHYEPMAEKR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggcagttgttctgctggcactcacgctggcctctgcgttcgctgcagaagag
tcgtgtgtgggtcgctgtcacagcttcaaccccatgaccaagtgccagtgtgactctatg
tgtcgctactacagcagctgctgcatggactttgacagtgcctgccctaggaagattgcc
cgtggtgacacatttgatgccccagaggacgatgtagtgaacacccccactacagcagtt
aacaccaaccctgggaccatggctgacccagagaccacaaacattcccccagttatgaac
acaactgctgtccccaccaccaccctggccccgaccaccaccacccacacccccaccctc
ccccctgacccagaggcagtgccctgcagcgggaagcctttcgacgccttcctccagctc
aagaacggttccatctacgccttcagaggtgattatttcttcgagctcgatgagagggcg
gttgtccccggtcaccccaaactgatctacgacaagtggggcatcagaggacctatagat
gctgcctttactcgcatcaactgccagggcaagacctacatcttcaagggaaaraagtat
tggcgttttgaggacgatgttctggatgccgattaccctcgggacatctctgtagggttt
gagaaggttccaactgacgtcgacgctgccttcgccataccagcacccggtcaccatggc
aaagagaaggtctacttcttcaaaggggaccagtactaccagtatgagtttaagcaccag
ccgtctcacgaagagtgtgtgcgcttgactaagtcttccccctctgtgctgttcacgcgc
tacaccaacctgtactgtgacgatacctgggagaacttattcacaatgcttttccaaggc
ctgcatggccacaaaaagggcccacggttcatcaataaagactgggtgggatcaagtccc
catagatgctgccatggtggccgtctttacatcagccctaaaccaactccctccccantc
cccacccccaggagacgagccaataggtggaggnaagacaggaggcggggtcagagaggc
agagccagacagagtcgctcagcgtacttggaggatttctttttagaagacgactggatg
ggaggaggcttcacctatnnctatgactacagtgactacacccccacacagactacacac
gacaagacactgcctgtacagaacgtctacttcttcaagaaagataaatactacagggtg
gatctccagaccaaacgcattgactttgccagccctccctacccacgatccattgccaag
tactggctgggctgcaaacaggagtctggcccgggcagagaagagatagacagtcattac
gagccaatggcagaaaagagatga
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