Salvelinus sp. IW2-2015 (Arctic char): 111950642
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Entry
111950642 CDS
T05762
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28 isoform X1
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111950642
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111950642
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111950642
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111950642
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111950642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_8
USP_UIM_N
UIM
Motif
Other DBs
NCBI-GeneID:
111950642
NCBI-ProteinID:
XP_023824163
LinkDB
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Position
LG23:17743043..17779491
Genome browser
AA seq
1227 aa
AA seq
DB search
MRVEQQSEHGENSTNSSLMLINQLREITGIQDPQILLRALNASQGDISHAVGLLTTQPPE
EGQGTEDTPDTEVNREAWGAQKGAPPKDDLQTAIELSLQESQAEERELNRALEASVEDSA
ARVKRKRCEAQGESCSPADWIRKEEWPVGIRNVGNTCWFSAVIQSLFHLPVFRRLVLNYC
LSERILEKCTSHSDKRNIAFMQELRCLFALMVGSTRRFVDPSAAVELLRDAFRSSEAQQV
HTEVQQDVSEFTHKLLDWLEDAFQLAANGNSPEDKKENPMVQLFYGTFVAERTHAGKTLT
NIEQFGQYPLQVNGFNNLDECLEGAMVEGEIEALHLDQTISSGSERWFSKLPPVLTFELS
RFEFNQSLGRPEKIHKKLEFPQIIYMDSLLYANRYLHKNNEQTHNRREEVKRLKEQLIVL
QQKLECYRNYGSGPTKYPLADMLQYVLEFACTKPTSVSPAEDVRLAASSPTPSGSNTKHT
EGNPDDTSQCQEPGDTGLSDSPTCQQQPPSGQRTPIYKPFTQCRAPMDTPPHPAPHSVTE
EELRFVKTCLQRWRTEVEINMNELKASIDRVSQALEGMYSDNSLCQVPYRLHAVLVHEGQ
ASAGHYWAYIYDHANQRWMKYNDVIVSESSWEELVRDSYGGMTNASAYCLMYIDDRLPHL
ITEDTDDETGQVMRAMDSLPPILRQYVREDNRWFQQELKEWEDQFCQQPQEEPVSPTAAV
TSTRAPSKDDPAKPVPQSGAAQEPTGEQEHVAESVVIPAVESGEPVPTSQPQSPVHVSPE
SAGSSPEESDHQAVSVTPEPCQHTSEDEEEQQHCQQLPPPQSPSPAAEMSGQAQTAAVTP
DPSTDVTTETDSETGFREAVAEAAAAPDTQADDEDDQDAPAPTRSRQQQPENVVSEVEIP
NVGRILVRADTDGYNEEMMLTPAMQGIIMAIAKARQVFDKDGPEAGLIKAFQEEYSRLFE
LSQEETTAQQDPRLHHALVYFFQNQAPSRVIERTLLEGFTDRNLSFDDRSISIMREARAK
LRLIKPEDMDMEEYMQWHDDYSLFRTVFVYLLTGLEQYQHGKVREALNYLNHAYKDNAML
LRRGEKRGMEQSLIAFYRRRCLKEMNDNAATLFRSGEVSDMEEGMIIMNEAVIPCMHLMS
RPDMVSQEDLDTMEAVRSHWCSYLGVDLDDSLQEKLGEFLPRVLDCSTEMVVLKDPPTVR
SKVPHDLCSRLAAIMESITNTSVVAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgagagttgaacaacagagtgaacatggggaaaactcaacgaattcgagcctgatgctg
atcaaccagctgagggagatcactggcatccaagacccacagatcctcctcagggccctg
aatgccagtcagggggacattagccatgctgttgggctgctgaccacacagccgccagag
gagggccaggggactgaggacacaccagacacagaagtcaacagggaggcctggggggcc
cagaaaggtgctcctcctaaagatgaccttcagacagccattgagctcagcttgcaagaa
tcccaggcagaggagagagagctcaacagggcactggaggccagtgtggaggacagcgct
gcacgggtgaagaggaagcgctgcgaggcccaaggagagagctgcagccctgcagactgg
atccgtaaggaggagtggcccgtgggcatccgcaatgtgggcaacacctgctggttcagt
gctgtcatacagtccctgttccacctgcccgtgttccgcagattggtacttaactactgc
ctgtctgagcgaatcctggagaagtgtacgagccactcggacaagaggaacatagccttc
atgcaggagctgcgctgtctctttgctctcatggtgggctccactcgtaggtttgtggac
ccgtctgctgccgtagagcttttgagagatgctttccgatccagtgaggcccaacaggta
cacactgaggtccaacaggatgtgagtgagttcacccacaaactccttgactggcttgaa
gatgcctttcagctggctgctaatggaaacagcccggaagataaaaaagaaaacccaatg
gttcagctgttctatgggacatttgtggcagagagaactcatgcgggcaagaccttaacc
aacattgagcagtttggccagtaccccttacaagtgaacggtttcaacaacttggatgaa
tgtcttgaaggcgccatggtagagggggagattgaagccctacatttggatcaaaccatt
tcgtctggcagcgagaggtggttctcaaagttaccaccagtgttgacctttgaactgtcc
aggtttgagttcaaccagtctttaggacgcccagaaaagattcataagaaactggaattc
ccacaaatcatatatatggacagtttactgtatgcgaacagataccttcacaagaacaat
gagcagacccacaacaggagagaagaagtgaagagactgaaggagcagctcatagtcctg
cagcagaaactggagtgctacagaaactatggctcagggccgacaaagtatccactggcg
gacatgttacagtacgtgttggagttcgcctgcaccaagcccaccagtgtgtccccagct
gaagatgtgaggctggctgcctcttcccccactccctccgggagcaacaccaagcacaca
gagggcaaccctgatgacaccagtcagtgccaggagccaggagacacaggcctgtccgac
agccccacctgccagcagcagcccccctcgggccagaggacacctatctacaagcccttc
acccagtgtagagcccccatggacaccccacctcacccagccccccacagtgtgaccgag
gaggagctgcgctttgtcaagacctgcctgcagcgctggaggacagaggtggagatcaac
atgaacgagctaaaggccagcatcgacagggtcagccaagcactggagggcatgtactcg
gataacagcctgtgtcaggtgccgtataggcttcacgccgtcctcgtccacgagggacaa
gcctcggccggccactactgggcttatatctacgaccacgccaaccagcgctggatgaag
tacaacgatgtcatcgtcagcgagtcctcctgggaggagctggtcagggactcgtacgga
ggcatgaccaacgccagtgcttattgtctcatgtacattgacgacaggctgcctcacctc
atcacagaggacacagatgacgagacaggccaggtcatgcgggccatggactccctgcca
cccatcctcaggcaatacgtgcgcgaggacaaccgctggttccagcaggagctcaaggag
tgggaagaccagttctgccagcagccacaggaggagccggtctctcccacagcagccgtc
acctccactcgtgctcccagtaaagacgacccagcaaaaccagtcccccaatctggcgca
gcccaggaacccactggagaacaggaacatgtggcagaatcggttgttataccagctgtg
gaatctggcgagccagtcccaacaagccagccccagtccccagtccatgtgtcaccggag
agtgctggcagcagcccagaggagagcgaccaccaggctgtctctgtcacgccagagccc
tgccaacataccagtgaggacgaggaggagcagcaacactgtcagcagctccccccacct
cagtctccgagccctgcagcagagatgagtggccaggcccagactgcagctgtgacccct
gacccctccacagacgtcaccactgagacagacagcgagactgggttcagagaggcagtg
gcggaagctgcagcagcgcctgacacccaggcagacgacgaggatgatcaggacgccccg
gcgccgaccagaagcaggcagcagcaaccagagaatgtggtgtcggaggtggagatcccc
aacgtgggcaggatcctggtccgggccgacactgacggctacaatgaagagatgatgcta
actcctgccatgcagggcatcattatggccatagccaaagccagacaggtgttcgacaag
gacggccctgaggctggcctcatcaaggcgttccaggaggagtactcccgtctgtttgag
ttgtctcaggaggagaccactgcccagcaggacccgcgcctgcaccatgccctggtctac
ttcttccagaaccaggcgcccagtcgcgtcatagagaggaccctgctggagggcttcacc
gaccgcaacctcagcttcgacgacaggtccattagtatcatgagagaggcccgtgccaaa
ctacgcctcatcaagccagaggatatggatatggaggaatatatgcaatggcatgatgac
tacagcctattccggacagtgtttgtctacctgctgacgggcctggaacagtaccagcat
ggaaaggtgcgcgaggcgctgaattacctcaaccacgcctacaaagacaacgccatgcta
ctgaggagaggggagaagagagggatggagcagtcgcttattgcattttacaggaggagg
tgtctcaaagagatgaatgacaacgcggccaccctgttcaggagcggcgaggtgagcgac
atggaggagggcatgatcatcatgaacgaggcggtcatcccctgcatgcacctgatgagc
cggccggacatggtcagccaggaagacctggacaccatggaggctgtacgcagccactgg
tgctcttacctgggagtagacctggatgactccctacaggagaagctgggtgagtttctg
cccagggttctggactgctcaacagagatggtggttctaaaagatccaccaacagtgcgc
tccaaagtgccccatgacctgtgcagccgcctggccgccatcatggagtctatcaccaac
acctctgtggtcgccgtcaagtaa
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integrated database retrieval system
