Salvelinus sp. IW2-2015 (Arctic char): 111950755
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Entry
111950755 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
salp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111950755
04082 Neuroactive ligand signaling
111950755
04519 Cadherin signaling
111950755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111950755
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111950755
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
DUF7886
Motif
Other DBs
NCBI-GeneID:
111950755
NCBI-ProteinID:
XP_023824391
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Position
LG23:complement(5000492..5025744)
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AA seq
463 aa
AA seq
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MGGRTGTAILLCVWACLLVTNVLCGKSSGQNGQTDEQKDNTTVFTRILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRNRLRQQCPSSLSLASMNTH
HCSLFFLTDAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggccatactgctatgtgtgtgggcctgtttgctggtgacc
aacgtgctttgtgggaaaagctctggacagaatggccagacggacgagcagaaagacaac
acgacagtgttcacccggatcctagacagtcttctagatggctacgacaatcgtctcaga
ccagggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattggg
cccgtctcggaccatgacatggaatacaccattgatgtgttcttccgtcaaagctggaag
gacgagcggctaaaatttaaagggccaatggcggttctccgtttgaacaacctgatggcc
agtaaaatctggacccctgacacattctttcacaatggcaagaagtctgtggcacacaac
atgactatgcccaacaaactcctacgaatcacagaggagggaactctgctctatactatg
aggaacaggctgcgtcagcagtgtccctccagcctctccttggcatccatgaatacacac
cactgctctctcttcttcctgacagatgcttacaccagggctgaggttgtgtacgtgtgg
acgagaggggcagcccagtctgttgtggtggctgaagatggctctcggctcaaccagtat
gatctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgtt
gtcatgacgacacacttccacctgaagaggaagatcggttattttgtcatccagacgtac
ctgccctgcatcatgacggtgatcctgtcccaggtgtccttctggctcaacagagagtcc
gtcccagccaggactgtgttcggagtgacgactgtgctgaccatgaccaccctcagtatc
agtgctaggaactctctccccaaggtggcctatgccacagccatggactggttcattgca
gtctgctatgcctttgtcttctctgccctcattgagtttgctacagtcaactacttcaca
aagaggggctacgcctgggatggaaaaagtgtggtgccagagaagcaaaagaagaagaag
gagtccctmctgaagaagaacaacaccacygcctacaccgccgccaccgctacagccttc
gcaccaaacattgccagagatcctggtttggccaccattgccaaaagcgctccccctccc
cccactgagcccaaagaagagccaaagcccaagccaccggaggccaagaagaccttcaac
agcgtcagcaagatcgacaggatcgccagaatagccttcccgttactctttggaaccttt
aacctggtctactgggcaacttacttgaataagaagcctaagttacagggtatgaccccg
gggtcccactaa
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