Salvelinus sp. IW2-2015 (Arctic char): 111950858
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Entry
111950858 CDS
T05762
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111950858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111950858
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111950858
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
111950858
NCBI-ProteinID:
XP_023824542
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Position
LG23:complement(22130123..22151332)
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AA seq
805 aa
AA seq
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MNKSKGPEYPSFXLETDDRTDDERAQSRQVKKPDRLVSALGLGSSGGPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLEENKEDRDSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRNGRNNTIEYLLDISEKMGDIKELVNAAYTDSYYKGQ
TALHIAIERRSTYFVELLIKKGANVHAKACGKFFQPHDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYQKVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTAARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRNLSRKFTEWVYGPVHSSLYD
LASLDSYEKNSVLEIIVYSSDIPNRHEMLQIEPLNRLLEEKWDKFAARMFFLNFLVYLVY
LSVFTVVAYYRKKGTPPFTLEHTRQEYLRLAGQLFITVGACYFFIRGILDLKRKRPSLDT
LLIDGYSEILFFLQAIFFLASSVLYCCGREEYLGFFVLCLALSWVNLLYFSRGYRHMGIY
SVMIQKMILSDILRFLFVYVTFLFGFSAAVVTLLMEPESPANNTAQPINSTDGRGRTFFL
PTEVDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLL
NMLIALMSRTVEKMSLESTSIWKLQRAITILDLERSLPRCLRRRLRSGVDKDLGTRAGEK
DRRWCFRVEEVNWNKWNTNLGIINEDPGSGDTARLSPTHSSRTLGRERSWRGFLGNVSRR
QHTQPKQQTQVESTEMSSLSPLSHV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcaaagggcccagagtacccttccttcwctctggagacggatgacaggacg
gatgatgagagggcacagagcagacaggtgaagaagcctgacaggctggtgtctgccctt
ggcttaggcagttcgggggggcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaagaagtacgatgtttg
gaggagaacaaagaggacagggacagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgacgttatgaagctggaggggctgcatcagtacttgcatcagtccatg
aagaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaatggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggtgacatcaaagaattagtaaatgctgcatacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcacctattttgttgagctattgatcaag
aaaggagcaaacgtccatgccaaagcctgtgggaaattcttccagccccatgatggaccc
agcttctactttggtgagctgcctctgtccctggctgcgtgcaccaaccagcctgaggtg
gtggacttcctgctggagaatgactaccagaaagtggacgtgagggagagtgattctctg
ggtaacatggtgttgcatgccctagtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtacgaccacatcctcacaacagctgcccgcctgcaccccaaatgg
aggctggaggacatagagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
aacctgtcccgtaaattcactgagtgggtttacggacccgtccactcctccctgtatgac
ctggcctcactggactcctacgagaagaactctgtcctggagatcatcgtctacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggacaagtttgctgctcggatgtttttcttaaacttcctggtttacctggtttac
ctctctgtcttcactgttgtcgcctactacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcagctttttataactgtgggagcc
tgctatttcttcataagagggatattagacttgaagagaaaacgtccaagcctggacact
ttgctgattgacggatacagtgaaatccttttttttctgcaggcgatcttcttcctggcc
tcctcagtactgtactgctgtggtagggaggagtacctgggtttttttgtgctgtgtctg
gctctcagctgggtcaacctgctctacttctccaggggatacagacacatgggcatctac
agtgtcatgatacagaagatgatcctaagtgatatcttgcgctttctctttgtctacgtt
accttcctctttgggttttcagcagcggtggtcactttgctgatggaacctgaatcgccg
gccaataatacagcacagccaataaacagcacagatggaagaggtcgtacctttttcctt
cccactgaggtggattcgtgtataaaacccaccttcaggaacatctctcacactatcatg
gagctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtac
aaggaagtgttttacatgctgctaatctcctacatcgtgctcacctacatcctgttgctc
aacatgctcatcgccctcatgagccgcactgtggagaagatgtccctggagagcaccagc
atctggaaactacagcgggccatcaccatcctggatctggaaaggagcctgcctcgctgc
ttgagaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaa
gaccgccgatggtgcttcagagtggaggaagtcaactggaacaaatggaacaccaacctg
ggaataatcaatgaggatccagggagcggagatacggccaggctgtcccctacacacagc
agcagaacgctaggcagagagaggagctggcgggggttcctgggaaatgtcagtcgaaga
caacatacacagcctaagcaacaaacacaagtagagagcacagagatgtcctctctatcc
cctctcagccatgtctga
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