Salvelinus sp. IW2-2015 (Arctic char): 111950949
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Entry
111950949 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111950949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111950949
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111950949
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
111950949
NCBI-ProteinID:
XP_023824672
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Position
LG23:36820982..36870562
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AA seq
399 aa
AA seq
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MVFSILLYDKCGTPLKSEYTIDVFFRQSWRDERLKFDGPMQVLPLNNLLASKIWTPDTFF
HNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDTHACPLKFGSYA
YTNNEVVYIWTKGDEDSVVVAKDGSRLNQYDLLGHDIGKESMSSSTGEYVVMTTYFHLKR
KIGYFVIQTYLPCIMTVILSQVSFWLNRESVPXRTVFGVTTVLTMTTLSISARNSLPKVA
YATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQEMRRRESASLSKKANNT
FNIVGTTYTINVVKDPGLTTVSRSATRATHHHHHHSHKVPKMDDSYVEAIKSYNRVSRVD
KVSRIIFPVLFFIFNLVYWATYINSKPRAIPSPRSTTHN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggtgttctccattttgctctacgacaagtgtgggactcctctgaagtcagagtacacc
atygatgtrttcttccgtcaragctggagggatgagaggctgaagttcgacgggcccatg
caggtcctgcctcttaacaacctcctggcyagtaagatctggactccagacaccttcttc
cacaacgggaagaaatctgtggcccacaacatgaccacgcccaacaaactgctacgactg
gtggacaacggtaccctgctttacactatgaggctgaccatccatgctgagtgtcccatg
cacttggaggatttccccatggatacacacgcctgtcctctgaagtttggaagctatgcg
tataccaacaatgaggttgtctatatctggaccaaaggagatgaggattctgtagtcgta
gcgaaggatggttcaaggctaaaccagtatgatctactaggccacgatattgggaaagaa
tccatgagttccagcacaggagaatatgtagtgatgacaacgtatttccatttgaaaagg
aaaattggctattttgtgattcaaacctacctcccstgcatcatgactgtcatcctgtct
caggtctccttctggctaaacagagagtcggttccgnnccgcactgtattcggggtcaca
acagttctgaccatgacaaccctgagtatcagtgccaggaactccctgcccaaggtggcc
tatgccacagctatggactggttcatggcagtatgctatgcctttgtcttctccgccctg
atagagtttgccacagtaaactacttcaccaagcgcagctgggcatgggacggcaagaag
gaggcccaggagatgaggagaagagaatctgcctccctttccaaaaaggccaataacaca
ttcaacattgtcggaactacctacaccatcaacgtggtaaaggacccaggtttaaccacc
gtctcaaggagtgccaccagagctacacaccaccaccaccaccacagccacaaggtccct
aaaatggacgactcatacgtggaagccataaagtcctacaaccgcgtcagcagagtggac
aaggtctcacgcatcatcttccctgtactgttcttcatcttcaacctggtctattgggcc
acatacatcaacagcaagccgcgcgccatcccctcccccaggtccaccacccacaattag
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