Salvelinus sp. IW2-2015 (Arctic char): 111950985
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Entry
111950985 CDS
T05762
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111950985 (cfap54)
Cilium and associated proteins [BR:
salp03037
]
Motile cilia and associated proteins
Sperm associated proteins
111950985 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
PM2_P3
Glutaredoxin2_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
111950985
NCBI-ProteinID:
XP_023824695
LinkDB
All DBs
Position
LG23:complement(48142441..48276388)
Genome browser
AA seq
2492 aa
AA seq
DB search
MEPLPASFYGNMYKRNPVISAFDGDIKIFMSFMKRISTLPTYDHNSYARGAKTLFEIWNK
YKPRLPTNYYEEQMLQMADFLFGIKLYRLGLWQGYCRYLQQFSTVTIEDIRDVDHFKSSF
FPKGFDTDQAKLTFRALQGCCLCAFQLERERGSQPTQKGVQRLLSILGFVRIMMQAVLPH
EHLCWLLYNGSLHIYNICRYLMSMSRAAQAMEFLLWACICLETSIPLMTARFLAWRATLY
CAVCQCYYDSQANVQAEVFARRALGKVCELGKLEEMSGLPATTETQRAYKVATIKLATMV
FKRSVYEPRRKPKGLFRHKQKSNLKEIQSMPWPRTPTERLLMELFEGNAAQFLAIVEALW
DTSRRPLQTGMPEEPEIQEVSLELMSAGISILSGIGGSTERARDDSLPTCLNAVTANFTL
TDMAAAGENKVSLDAAVKFVKLLFRYEQWDMFCILSDTLQHTVLPRMEGRSFRKSELELR
LLDSMERLMSTQKIRLNTKDDTVSEKDRHLGVVMSEEFVGLVQALYSCVCGSAQDVQPDR
DLVMDIVLYLWSKCKIIFQRAQVRHWDPIHFLGKMENLDKWVWTLSVLSEVAHVCELADS
DPMVLAEMTIRLAMVLESTADSTVHSGRKTASSEDDSVESTPTEKNTDTFSMFKKSTAEQ
LQSVWNVVERGLEGVIRGWTRLLPCDGSAISDMVFMQKFAGPAMHSPAGGGEGERVKSPS
LSLSLSLVPMDLHLELLSVQHRVSLKLLNTWPAELQQHAGDSRRSMRPPGGVEIPENMAD
RARGESVLLERIRKNTISIALFLVQKALLSHRKDQNSSATKRLLEEAVVLIEKAEVEERK
LFSSSGPSERKERGGEEERNTRPPPPILLSRTYHSMTFTPAPYALEEQVCWYHIYAREAE
GINLKVRLGDSTLVGTGDEVPASGERLLRVDCLEPNQKYVFAVAAYDAGGKLVGNAIGET
TRPLLASLPLPLLTTWAHLAQAAYQTGQHTLAKRACSELWSHFNQPKGLQEPGATLEGLA
QTKLRLETLQRSSPLLLHLFLSSILMQTEIHIQEGALFCDTLSDGGPLIWGQEARLAECE
RMLVAIDLALWLNDSSAALQAVVRCYGLLAPLMFHQIPAEPVVQVLMKCLAVLTEISGVV
KQKRPATTSESLLHMIACITYYVAKALRTLEKHRLAATVIEQGKKLLHDILETVQGPSKP
LPVEPDGLLKKAGSIQGEEEQNEQMKALEGSAMKNKRTGTFMQHDSSAWSRAVAHGHELT
GQEDPILLYPIVTNSPLKAAFKDLMKFKRKACFMEFAVLLLQRTMQADHLELVLQWGHDI
FGWLSRRDEGLTGPKKGPGDRSTSGKELKKYSSSIMEYKKNKASTFWSDKKRKEFLQKKQ
LTALKAQNTERECKAVDTMLNQLAPLVRRHQRRRRLRQVCSEEWLWRCHLNLSIARAHLG
LLRRSLENHQGLGALQHSYSQLPPLLFSLAHSGTLVRWRNMHQHIGVPDLIPPPPKATPR
PCLRATLHKAKESGQAAATTTSGEDFNTTESSEQDSEQDSPRTQPAVDSDYSEPSVMTTT
PTRRTATQLLESLNKAALHLRRAMVLAHRGGHWTTLQCVCRTLWDQGCTITLLVDRGTSM
EPPIPLTLDQLYTVLTPLFELATDLVMNMMETMQLWQVFELEDEEMEASMHFSAPLDDGT
LVDLRWIRSLTLHTLELLYLEARWETLAHLALLFNTHTRERYTHMITPILVHAQRRLLER
ISYFGGPPVPQPHFIKTQNITGEKITCKKYTGRQLLNCWTPPAVPAPRRGCNTPTNPNAE
LLELSEVRRAMCLVCVPLDVEDTLCCFREALEKGHHTLQNFQHSRTLLLLLLAHTQPLFE
VPFCKENSSKAQGHGRVDFNVTVCTAPAIGPPDLATEDYRTLSSIYGCPLPPNQIHTVIN
SYSNSIQYLQANNHESLRVQALHDLGNLHYYNGNRRAAHSYWSKAVDCALQSSGVLDSWD
GVSWGTSSLQHQPTLKQAGVWGCLQGALLTAKIAQYAFTSNISQRTKCCLLSAQLFKCLL
RASLPHPQSDLQYSSYTVGEELVPGLDLFSEPDRGHLGTTVSSLAFLCHWLYTSGHHLTA
LPMLALYLHFVGTVCRDPHLTIKGRILKVKVLTELGQYCQAMKETSQMTQGEEIPLPHGC
YSGIEKHATIRKFFTNKSLMDSANIQALEDLVNRRLGTEASVLYGPRLSRRLTLARVQLI
LALSSTIHSLPEPQDISDGAVRCSVVRRTSSTPGIPNSPPGERDSDSDKSQGGSPTRKTR
EPKGLHLDPQKDKLTLSKLKALLLREVCRLLSPQLQLCLSSQLHSDPEELELAIDTYLLL
SNLYLQQGKTAYSADMAVSAMSLLQNSPITLRGSPSPVHRPLSTSLRRQSRPKSEQGSMR
EAEHHAPSPQPGDCPQAVEARERMERSLWLHCRLAVVRSLVAHIPGTAIYPVTWTASRVG
ARHKRVEEPGAGPAHSCPPLKQTLPPSAWRAC
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atggaaccactgccagcttcattttacgggaacatgtataaaagaaacccagtaatatca
gcgtttgatggagacataaaaatatttatgtcatttatgaaacgaattagtactttgcca
acctacgaccacaactcctacgcaagaggtgccaaaactctgtttgaaatatggaacaag
tataaacctcgactaccaaccaactactatgaagaacagatgctgcaaatggcagatttt
ctttttggcatcaagttatacaggctgggtctatggcagggctactgtcgctacctgcag
cagttcagcactgtgaccatagaggacattagggatgttgaccacttcaagtcctccttc
ttccccaagggtttcgacacagaccaagccaagctgacgttccgggctctgcagggctgc
tgcctatgtgccttccagctggagagggaaagagggagccagcccacccagaagggggtc
cagagactcctcagcatcctggggtttgtcaggatcatgatgcaggccgtgcttccccac
gaacatctctgctggcttctttacaatggttcactccatatctacaacatctgtagatac
ctgatgtccatgagccgcgctgcacaggcgatggagttccttctgtgggcctgtatctgt
ctggagacctccatccccctgatgactgccaggttcctggcctggagggcaactctgtac
tgtgctgtgtgccagtgctactacgacagccaagccaatgttcaggcagaggtgtttgca
cgacgagccctgggtaaagtctgtgagctgggcaagctggaagagatgagtggtctacct
gccaccactgagactcagagagcatacaaagtggccaccattaagctagctaccatggtg
tttaaacggtcggtgtatgaacccaggaggaaacctaaaggcctcttcagacacaagcag
aagagtaacctcaaggagattcagagcatgccatggcctcgaacccctacagagcgactg
ttgatggagctgtttgaggggaacgctgcccagttcctggcgatagtggaagcgctgtgg
gacacctcccgccgcccactacagactggcatgcctgaggagccagagatacaggaggtc
tccctagaactcatgtctgcaggcatcagtatactgtctggaattggagggtccactgag
cgagccagggatgacagtctccccacctgtttaaacgcagtgacagccaactttactctg
acggacatggcggctgctggggagaacaaggtgtctttggatgcagcggtgaagtttgtc
aagctgctgtttcgatatgagcagtgggacatgttctgtatcctctctgacacactgcag
cacaccgtactgcctagaatggaggggaggtctttcaggaagtcagagctggagctgagg
ttgctggactccatggagcgcctcatgtctacacagaagatcagactcaacaccaaggac
gacactgtgtctgagaaggacaggcatctgggagtggttatgagtgaggagtttgttggt
ctggtgcaggccttatacagctgtgtctgtggttcagctcaggatgtgcaacctgacaga
gacctggtgatggatatagtgctgtacctctggtctaaatgtaagatcattttccagaga
gcccaggttcgacactgggaccctatacacttcctgggcaagatggagaacctggacaag
tgggtgtggaccctgtctgtgctcagtgaggtggctcatgtgtgtgagctggctgactca
gatcccatggtgttagctgagatgaccatcaggctggccatggtgctggagagcactgct
gactccactgtccattcaggcaggaagacagcctcaagcgaagacgacagcgtggagtcg
acacccacagagaaaaacacagacactttttcaatgttcaagaagtcgacagcggagcag
ctgcagtcagtgtggaacgtggtagagagaggtctggagggagtgatcagaggctggacc
agactactgccctgtgatggatcagccatctctgacatggtcttcatgcagaagtttgct
gggccggccatgcattcccctgcaggaggaggagagggagagagggtgaagagtccctcc
ctgtctctctctctctctctggtccccatggacctgcatctggaactgctgtctgtccag
cacagagtctccctcaagctgctcaacacctggccagctgagctgcagcagcatgctggt
gacagtaggagatctatgaggccccctggtggtgtggagatacctgagaacatggctgac
agagccagaggagagtcagtgcttctggagcggatcagaaagaatacgatctccatagct
ctgttcctggtccagaaggctctgctgtcccacaggaaggaccagaacagcagcgccacc
aagagactgctagaggaggctgttgtcctgatagagaaggcagaggtggaggagaggaag
ctgttcagctcctctggtccgtcggagaggaaggagagaggaggagaggaggagagaaac
actagacctcctcctcctatcctcctgtcccgtacctaccactccatgaccttcactcct
gcaccctacgccctggaggaacaggtgtgctggtaccatatctatgcacgtgaggctgag
ggaatcaacctgaaagtcagactaggagacagcaccctggtgggcactggagacgaggtt
cctgcatcaggggagcgactgctacgagtggactgcttggagccgaaccagaagtatgtg
tttgctgtagcagcctacgacgccgggggtaaactggtgggcaatgccattggagagaca
accaggcctctgctagcctccctgcctctgccactgctcaccacctgggcacacctggca
caggcagcgtaccagacagggcaacacactctagccaagagagcctgcagtgaactgtgg
agccatttcaaccagcctaaaggtcttcaagaaccaggggccactttagaggggctagct
cagaccaagctgcgtttggagactctgcagcgctcctctcctctcctcctccacctcttc
ctctcctccatccttatgcagacagagatccacatccaggagggtgcgctgttctgtgac
accctcagtgatgggggaccactcatttggggacaggaggccaggttggcagagtgtgag
cggatgctggtggccatagacctggctctctggttgaatgacagcagcgctgccctgcag
gccgtggtgaggtgttatggcctgctggccccgctcatgtttcaccagatcccagcagag
cctgttgtacaggtgctgatgaagtgcctggcggtgctgacagagatctcaggagttgtt
aaacagaaacgcccagccaccacctcagagtctctcctgcacatgatagcctgtataaca
tattatgttgccaaggcccttcgcaccctggagaagcaccgtttggcagcaacagtgatc
gaacagggaaagaaactcctccatgatatcctggagaccgtgcagggacccagtaagccc
cttccagtggagccagatgggttgctgaagaaggcaggcagcatccagggagaggaggag
cagaatgaacagatgaaggctctggagggcagtgccatgaagaacaagaggactggaacc
ttcatgcagcatgacagctcagcctggagcagggcggtggcccatggtcatgaactgact
ggacaggaggaccccattctgctgtaccccatcgtcaccaacagccctctgaaggctgct
ttcaaagatttgatgaagttcaagcgcaaggcgtgcttcatggagtttgctgtgctgctg
ctccagaggaccatgcaggcagaccatctagagctggtcctgcagtggggacacgacata
tttggctggcttagcaggagggatgagggactgacagggcctaagaagggcccgggggac
agatcaacctcagggaaagaactgaagaagtactcctcctccatcatggagtacaagaag
aacaaagctagtacattctggagtgacaagaagaggaaggagtttctccagaagaaacaa
ctgactgctctgaaagcacagaacacagagagggagtgtaaggcggtggacaccatgctg
aaccagctagcccccctggtgcgccgtcaccagcgtcggaggcgtctgagacaggtgtgt
tctgaggagtggctgtggaggtgtcacctcaaccttagcatcgccagggctcacctggga
ctactgagaaggagcctggagaaccaccagggccttggggccctacaacacagctacagc
cagctgcctccgttgttgttctccctggcccactctggtactctggtgaggtggaggaac
atgcatcagcacatcggagtccctgacctgatccccccgccccccaaagccacgccccgg
ccctgcctcagagccaccctccacaaggccaaggagagtggacaggctgccgccaccacc
accagtggagaggacttcaacacgacagagagcagtgagcaggacagtgagcaggactct
ccccgtacccagcccgctgtggactcggactatagtgagccctcagtgatgaccaccacc
ccgaccagacgcaccgccactcagctgctcgagtcactcaacaaggctgccctgcacctc
cgcagagccatggtacttgcccatcgtgggggccactggacaacgttgcagtgtgtgtgt
cggacactatgggaccagggctgtaccatcactctactagtagacaggggtacatccatg
gagccccctatccctttaacattggaccagctctacactgtcctcacccctttgtttgag
ctggctacagacctcgtcatgaacatgatggagacgatgcagctctggcaggtgtttgaa
ttggaggatgaggagatggaggccagcatgcacttctccgcacctctggatgacggtacc
ctggtggacctgagatggatcaggagcctcacccttcacacccttgagctgctctacctt
gaggctcgctgggagactctggctcacctcgccctgctcttcaacacacacacacgagag
cgctacacccacatgatcactcctatcctggtccacgctcagaggagactgctagagagg
atcagctactttggaggacctccggtccctcagccacacttcatcaaaacgcagaacatc
actggagagaagatcacctgtaagaartatacagggagacagctgctgaattgctggact
ccccctgctgtgcctgcccccagacgagggtgcaacactcccaccaacccaaacgctgag
ctcctcgaactctctgaggtgcgccgagccatgtgtctggtgtgtgttcctctggatgtg
gaggatacactgtgttgtttcagggaggccctggagaagggccatcacactctgcagaac
ttccaacacagccgcacactgctactactgctgctggcacacacacagcccttgtttgag
gttccattctgtaaggagaacagtagcaaggctcagggtcatggcagggtggactttaac
gtgacggtgtgcactgccccggccatcggccctccagacctggccactgaggactacagg
accctgagttctatctacggctgccctctgccccccaaccagatacacaccgtcatcaac
tcctatagcaactccatacagtaccttcaggccaacaaccatgagtctctcagggtacag
gcgctacatgacctgggaaacctgcactattataatggaaacagaagggcagctcattcc
tactggagcaaggcagtggactgtgccctgcagagctctggggtgctagactcatgggac
ggggtgtcgtggggtacaagttccctccaacaccaacccaccctgaagcaggctggagtc
tggggctgtctgcagggagctttactgaccgctaagatcgcacagtatgccttyacctct
aatatcagtcagcgcacaaaatgctgcctcctatctgcccagcttttcaagtgtctcctg
cgggcctccctgccccaccctcagagtgacctgcagtactcatcctatactgtaggagag
gagctggttcctggtctggacctgttctctgaacctgaccgaggacacctgggaaccact
gtgtccagcctggccttcctctgccactggctctacacctcaggacaccatctcacagcc
ctgcctatgcttgctctctacctgcattttgtggggactgtttgccgagacccacacctc
accattaaaggaaggatactgaaggtgaaggtgctgacagagctggggcagtactgtcag
gccatgaaggagacgtcccagatgactcagggagaggagatcccactgccccacggatgt
tacagcggcatagagaaacatgcgacaatcagaaagttcttcaccaacaagtctctcatg
gactctgcaaacatacaggccctggaggacttagtgaaccgtcgtctgggcacagaggcc
agtgttctgtatggccccagactgagcaggcgtctcaccctggccagagtacagctcata
ctggccctcagctccaccatacactccctgcctgaacctcaagatatctcagatggggcg
gtgcgttgcagtgttgtgaggaggacatccagtaccccaggtatccctaactctcccccc
ggagagagggatagtgacagtgacaaatcacaaggtggctcccccaccaggaagaccagg
gagcccaaaggactgcaccttgacccccagaaagacaagctcaccctcagcaaattaaag
gcgttactgctgagagaggtgtgtcgtctcctgagcccccagctgcagctctgtctttcc
tctcagctccactctgaccctgaggaactggagctggctatagacacctacctgctactg
tctaacctctacctgcagcaaggcaaaaccgcttacagtgctgacatggcagtgtctgct
atgagtctgctccagaactctcccatcactctgaggggaagcccctcccctgtccacaga
cccctctccacctccctcagaagacagtccagacctaagagtgaacagggcagtatgagg
gaggcagagcaccatgcccccagtccacagccaggtgactgtccccaggcagtagaggcc
agagagaggatggaacggtctctgtggctccactgtagactggctgtggtacgcagtctg
gtcgcacacatccctggcactgccatctacccagtaacatggacagcctcacgtgtggga
gcgcgccacaagcgtgttgaggagccaggcgccggcccagcccattcctgcccgcctctc
aagcagaccctgcccccgtccgcctggcgtgcctgctga
DBGET
integrated database retrieval system
