Salvelinus sp. IW2-2015 (Arctic char): 111951021
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Entry
111951021 CDS
T05762
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecule (CAM) interaction
salp04517
IgSF CAM signaling
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111951021
04517 IgSF CAM signaling
111951021
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111951021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111951021
04090 CD molecules [BR:
salp04090
]
111951021
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111951021
CD molecules [BR:
salp04090
]
Proteins
111951021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
Ig_PVRIG
DUF6022
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
111951021
NCBI-ProteinID:
XP_023824754
LinkDB
All DBs
Position
LG23:30212115..30289648
Genome browser
AA seq
570 aa
AA seq
DB search
MEDGSTFKMFLPCLRNYPLYKGQHAVFIVLLYILTGVGGSQVLVPQKVSAVLGKNVTLGC
SVEVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPNYVRRLSFRSPSSHDATIVLE
DVGFEDIGVYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVSLQDEANGTTSTQVRYLWQPTRHVQGHALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGXENIQLTCKANANPPAHHFTWIRLDGKMPEGV
EIVNNTLLFLRPLQRNDSGVYRCEVANDINLRSRDLRIRVQDPPTTSMPYTTPAPVLTGS
ASSSTSVGDKRRVLFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVVGGVCYLRQRQT
FRGDYYTKQYLGPSDMQKAPPQHKLHPTKPANNVYLDKDREEWGDRERNHVRDRERLHMH
PTSTTIINNHREPEYQPNGLTRAMRNGDHHDHLRSYPSPHQTGHARYAAPSHPLSTGSPY
LSDDCYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctaaggaattacccgctttac
aaaggacagcatgctgtatttattgttcttctgtacatcttgacaggtgtggggggcagt
caggtgttggttccccagaaggtgagtgctgtattggggaagaatgtgacgttgggctgt
agcgtggaggtgggggccaacctcagtcttacccagagttcctgggagcgccggctcccc
acaggctcggtgactgtggcggtgtacaatcccgtgtttggcatctcgatccccccaaac
tatgtgcgccgcctgtccttccgctcgccctcctcccatgacgccaccatcgtactggag
gatgtgggctttgaggacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccaaggtgtatgtgtcggct
ggctcggtggctctgatcgacgagggcaatgaaaccgtggtggccacctgcatcgctgag
cgggcccggccccccgccgaagtctcctgggagacggacctgtttggccaatcagaggtg
tcgctgcaggacgaggcaaacggcacgaccagcacccaggtgcgctacctgtggcagccc
acccgccacgtccagggtcacgccctcacctgtgtggtgcgccatcctgccctgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacatcgtggtagtaggt
tatgacggtgactggtatgtgggccytgagaacatccaactgacctgcaaagccaacgca
aacccaccagcacaccacttcacatggatcagactggacgggaaaatgccagagggggtg
gagatagtgaacaacacgttgctgtttctgaggcccctccaacggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgcggatacgcgta
caagatcctcccaccacctccatgccctacaccacccctgcgcctgtcctaaccggctct
gcctcctcatccacctctgtgggagataagcgacgggtcctcttcacctcccccaccctg
gcagccctgccccccgacaaccacctgggcaccatcgtgggcggggctgtgggcggagcc
ttgttcctcctgctgctgctggtagtgggcggggtatgttacctacgacaacggcagacc
ttccgcggggactactacactaagcagtacctagggccttcagacatgcagaaggctcct
ccacagcacaagctccaccccactaagcctgccaataacgtctacctagacaaggaccgc
gaagagtggggcgaccgcgaacgcaaccacgtgcgggaccgtgaacgcctccacatgcat
ccaacatcaacaaccatcataaacaaccacagagaaccggagtaccagcccaacggcctc
acgagggcgatgaggaacggagaccaccacgaccacctgcgtagctaccccagcccccac
caaacaggccatgctagatacgctgccccgtcacacccactgagcactggctccccctac
ctgtcggatgactgctatgacagcggggctgagggggactatgtctcccatatggatggc
tcagtgatctcacgcagggagtggtacgtctga
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