Salvelinus sp. IW2-2015 (Arctic char): 111951173
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Entry
111951173 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: proto-oncogene DBL-like
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111951173
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111951173
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
PH
CRAL_TRIO_2
Spectrin
Motif
Other DBs
NCBI-GeneID:
111951173
NCBI-ProteinID:
XP_023824987
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All DBs
Position
LG23:41569596..41585902
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AA seq
1093 aa
AA seq
DB search
MAEANPFRGLPRLRRAAMSFPGNLHLVLVLRPTSLLQSPSGTGTDLGFRFSQEDFMLKMP
VVMLSSVTDLLRYIDENQLTSEFGGTLEYCHSDWVVLRTAIESFAVTVKEIAQMLQSFGT
ELAETELPDEADDIEFLLRSHTDKYRQLKDDIRSVMREGRHLLSNLEAAKAAKADGQEDK
DIKQDWDTVQRLLAQLRDMEMAFDGFFEKHHLKLQQYLQLMRYEMSFHEMEEILDRLSGQ
EKEVAAVGGTVVQTEQLLKDLESLDTRAQEEMGRAQIIILRGHQLATGHHYALALIVQRC
NELRHHCDVLTTAIRAKRAALTRIRDLLLRLEEACERTHTHTHTIVTPILPYPLIKLVES
VMSVMVSVSCFHASLCVCVSVFVCLRPPSGRRWCDEGAYLLANQLVDKFQSKEGAQGALQ
DIERLQEETPLCLSQSPDVLSLEFEAILTPQLESQIGVATEKLSAMQRMIHNRQACLRKL
ADIQVRPIQLVAPRPEHSPRCKSPLFSPKHSVDFNSVLNSRFSFDLLPGKRAARKSPRKI
EVMHDYEENRNSLSYGQEGEESPDQLKRHIIKELIETERIYVEELLSVLLGYRAEMDNPA
LSHLLPSVLRSKKEVLFGNMPEIYKFHSRTFLQDLEGCLETPERVGACFLRRKEKFQVYE
RYCQNKPHSELLWRQCSASLFFQACQKKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKHS
ADSDYISELQGALESMLNLLKSVNDSMHQIAITGYEGELSDLGRVLMQGSFSVWISHKRG
PTRMKARFKPMQRHLFLHEHALLFCKRREEHGEGHDRTPFYSFKHCLRMSAVGITENVKG
DVKKFELWYSGREEVYVVQAPTFQIKIAWLTEIRKILTNQQRLLQEDIPPIQLSEQTPLS
PPSTDSLAHMSVCMPWSTGQITGCSGCFDVLPHSKPLDQSLSTEEAESSGRTSPVLTDPV
VFSPQPQHNNRRSWPGTSHSVDICEGPEDWSTTDLSNLSDSDEEDDPTPLVPGRYRALVE
SSVCSTDDLIIKCGDVIQLLDQDTVGKWLVRNVSRCDEGRVSADNLHRILGESGRAHSGR
MEGNQKTRKLSSL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccaatccttttaggggactgccccgtttgcggagggccgcgatgtccttc
ccggggaatctccacctggtgttggttctacggcccaccagcctcctgcagagtccctca
ggcaccggcactgacttgggcttccgcttcagccaggaggacttcatgctcaagatgccg
gtggttatgctcagttcagtgacggacctgcttcgctacatcgatgagaaccagctgacc
tcagagtttggtggaactctggagtactgccacagtgactgggtggtccttcgtacggct
attgagagctttgccgtgaccgtgaaggagatagcccagatgctgcagtcgttcggcacc
gagctcgccgagaccgagcttccagatgaggccgacgacatcgagttcctcctcagatcc
cacactgacaaatacaggcagctgaaagatgayatcaggtcagtgatgcgggagggccgt
cacttgctctccaacctggaagccgccaaggcagctaaagctgatggtcaggaggacaaa
gatatcaaacaggactgggacacggtgcagaggcttctggcccaactacgggacatggag
atggcttttgatggcttttttgagaagcatcacctgaaactgcagcagtaccttcagctg
atgagatacgagatgagctttcatgagatggaggagatcctggaccggctgtctggtcag
gagaaggaggtcgctgcagtgggcgggactgtggtccagacagaacagctattaaaagat
ctggagtcactggacacccgcgcacaggaagagatgggccgtgcccagataatcatcctg
cgcggccaccagctggccaccggtcaccactacgctctggccctgatcgtccagcggtgc
aacgagctgcggcaccactgtgacgtgctgaccaccgctatccgagccaaacgggctgcc
ctcacccgcatacgtgacctgctgctgcgtctggaagaggcatgcgagcgcacacacaca
cacacacacacaattgtaacccccatcctcccatatccactcataaagcttgtagagtct
gtgatgtctgtgatggtcagtgtgtcatgcttccatgcgtctctgtgtgtgtgtgtgtct
gtgtttgtgtgtctacgtccgccctcaggccggcgctggtgtgacgagggggcttacctc
ttagccaatcagctggtggataagttccagtccaaggagggagctcagggagcgctgcag
gatatagagagactccaggaggagacaccgttgtgtctgagccaaagccctgatgtcctc
agtctggagttcgaggccatcctgaccccacagctagagtctcagattggggtggccact
gagaagctgtctgccatgcagagaatgatccacaacagacaggcatgtctgaggaagctg
gctgacattcaggtgcggcccatccagctggtggcccctcggcctgaacactctccccgg
tgcaaatcccctctcttctcccccaaacacagtgtagatttcaactcggttctcaactca
aggttctcttttgacctcttacctggcaagagggcagctcggaaaagccctagaaagata
gaggtgatgcatgactatgaggagaatcgcaactctctctcytacggccaggagggagag
gagagcccagaccagctgaaacgacacataatcaaagagcttattgagacagagaggatc
tatgtagaggagctgctctctgtcttgctgggttacagggcagagatggataaccccgcc
ctctcccacctactgccctctgtcctgcgcagcaagaaggaggtcctgtttgggaatatg
ccagagatctacaaattccatagcaggaccttcctccaggacttggaggggtgcctggag
actcccgagagggttggagcctgctttctacgacggaaagaaaagttccaggtgtacgag
cgttactgtcagaacaaaccgcactccgagttgctatggagacagtgctctgcttccctc
ttcttccaggcgtgtcagaagaagctggagcacaaactggggttggactcgtacctccta
aagccygtccagagactgaccaagtaccagctgctgctcaaggaactgttgaagcacagt
gcagacagtgattatatctctgagctgcagggggcactagagtctatgctgaatctcctc
aagtctgtcaacgactccatgcaccagatcgccatcacaggttatgagggggagctgagt
gacctgggtcgggtgctgatgcagggctccttcagtgtgtggatcagccataagaggggc
ccgacgaggatgaaggcccgtttcaaacccatgcagaggcatctcttcctgcatgagcac
gctctgctcttctgcaagcgccgcgaggagcatggggagggccacgaccgcacccccttc
tatagcttcaagcactgcctgaggatgagtgctgttggcatcactgagaatgtcaaaggc
gacgtgaagaagtttgagctctggtacagtggcagagaggaggtgtatgttgttcaggcc
cctacgttccagatcaagatcgcctggctcaccgagatcaggaaaattctcaccaaccaa
cagaggctcctccaagaagacattccccctattcaactctcagagcagactcctctgtct
cctccctctactgacagtctggctcatatgtcggtgtgcatgccgtggagtaccgggcag
atcactggctgctcaggttgttttgatgtccttcctcacagtaagcctctagaccagtcc
ctcagcacggaggaggccgagtcgtcgggccgcaccagccccgtcctcacagaccccgtg
gtcttctccccccagccccagcacaacaatcgacgcagttggcctggcacctcccactca
gtggacatctgtgagggtccggaggactggagcaccactgacttgtccaacctgtcagac
tctgacgaggaggacgaccctactccactggttcctgggaggtacagggccctggtggaa
agtagtgtgtgcagtacagatgacctcatcattaagtgcggcgatgtcatccagctgctg
gatcaggacactgtagggaagtggctcgtgaggaatgtcagtcgttgtgatgagggtcgg
gtctcagctgataacctgcacaggattctgggagagagtggccgtgcccactcaggcagg
atggaagggaatcagaaaacccgaaagctcagctctctctga
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