Salvelinus sp. IW2-2015 (Arctic char): 111951276
Help
Entry
111951276 CDS
T05762
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111951276
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111951276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
111951276
NCBI-ProteinID:
XP_023825090
LinkDB
All DBs
Position
LG24:7645458..7653090
Genome browser
AA seq
955 aa
AA seq
DB search
MNPVGDTKCAHIGEDLNMVQLSPSPARDVSPSPECSEKGRQGSPKAGSPKIGSSGGLGPL
QLALAASTTIYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAV
EKYDEVIHNLQFAQELHKTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCXVLQVKFLL
QTLLQHEHIREDLLSARKLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLE
GNNKPIAGTTYKVLKAKLAKLMDCGYFDCVPPXPSKSPKEVEVPMTKKTVSQTASLSTLM
TSNKKDVPSREFLNRHYLPDTDPNGCRDTPVTQNWKAEFQAMKEQEPPDSWDMESDSTQP
VIQKPWRGAAVFISKVPVTTKKQNSEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLP
KDPILRKQQLEDLMTKIRGSFSFMQDSLLDGEGSPTNGHPRLGRRTSGSSSPLVQRESRR
SPVDLLPKTLHSTPLPSKLLPVDDEPNLTNGDGGCLESCELDLTTEDLAHVITIDPCLLL
SESETACPSPPPFYRRESSISITLDEKTSAPTTESGKQSPCNGVVPPCTPTPTQGQSFST
PPSRRTLSMVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPS
EDEHLQSVNQSECLVGSGGQIFLSPSQSCGTMGRSDQSYYKGSVRGIARGGKGLAHSYFR
SSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNGGWSDSSQVSSPDREGNYS
LVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQLLRVAFTAARTANYTPGT
LDQPIAFDQLHSNLGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMV
SAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgtcggcgacactaaatgcgcacacattggcgaggatctgaacatggtgcag
ctgtctccatccccagcccgggatgtgtctccttcacctgagtgctccgagaaggggagg
caggggagcccgaaggcaggtagccccaagattggctcctctggtgggctgggtcctctc
cagctagccctggcagcctccaccaccatctaccagggctacgagagttacatcgaggat
ggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaa
gactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagatagatgcagtg
gagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcacaagaccctt
gggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaaggagcagatg
gccaagcaggaggtagagaagaggaggctgtgcrtagtgctgcaggttaagttcctcctg
cagaccctgctgcagcacgagcacatcagggaggacctcctctctgcccgcaagctccag
gttgcagagctacagagcctgcttgagctcgctgaactactgggggtgaagagggacaac
aatgtgagtttggaggagcagatggagagcgcagccctggtctacctggacctgctggag
gggaataataaaccaatagctggaaccacctacaaggtcctraaggctaagttggcgaag
ctgatggattgtgggtactttgattgtgtaccgccgmctccgagcaagagtcccaaggaa
gtagaggttcccatgaccaagaagacggtgtctcaaacagccagcctctctaccctaatg
acgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacactcccgttactcagaactggaaggctgagttccag
gccatgaaggaacaggagccaccggactcgtgggatatggagtcggactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttcatctccaaagtgccggttactacc
aagaaacaaaattccgaacccaaacagagaagagcgaagtccaaaagggagcgggacgcc
acagcggcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaagcagcagctggaggacctgatgaccaagatcagaggctcc
ttcagcttcatgcaggattctcttctggatggagaaggatcacccactaacggccatcct
agactgggccggcgtacctctggatcctcctctccactcgtacagagggagtcaaggaga
agcccagtggaccttctccccaaaacactgcattccactccattgccttctaaactcctc
cctgttgatgacgaacccaatctgaccaatggagacgggggttgtctagagagctgtgag
ctggacctaactacagaggacctagctcacgtcataaccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcctcctcccttctaccgtagggagtcctccatc
tccatcaccctggacgagaagacctctgctccgactactgaatctgggaagcaatccccc
tgtaacggggtggtgcctccttgtaccccaacccccacccaggggcagtcgttttctacc
cctcccagcagacgtacactcagcatggtccccttccagaccatgcattcggtattcaag
gtgaacgcccccttacttccgactggagactttaaatccgatattatcccctattcggac
tccaacggcctgtgctatgtcaccaccagcacccagaccccaccggagtttgctccgtcg
gaggacgaacacctacagtcggtgaaccagtctgaatgtctggtgggtagtggtgggcag
atcttcctgtcccctagccaatcctgtggcaccatgggccgttctgaccaatcatactac
aaaggatctgttagaggtattgcacgtggtggcaagggactggcacactcctactttcgc
tcttctggtgggcacagaggaggaagcttcatcccccaggctcacttgtacggcgctcgg
gacactggctaccagcacagctacaggcgtggtggaggcaatgcaggacaaaggcacaat
aatggtggttggagtgactcctcccaggtgagcagcccagaccgggagggcaactactcc
ctggtggactccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccag
gtgacccctcatgccccccacaccctgatgcacgtacccatgtacccgctcccccagcat
ccgcagctcctccgcgtggccttcacagcagcccgcacagccaactacaccccgggcacc
ctggaccagcccatcgcctttgaccagctccacagcaacctgggggaaatgttcaacacc
aacgtgggtcgtttcacctgcccagccaacggcacctacgtcttcctcttccacatcctc
aagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatggtg
tctgcgtacgccaacgacggggctccggaccacgagacggccagcaaccactccatcctg
cagctgtaccagggagaccaggtgtggctgcgtctgcaccgcggctccatctatggcagc
agctggaagtacagcacattctctggcttcctgctctaccaggactga
DBGET
integrated database retrieval system