Salvelinus sp. IW2-2015 (Arctic char): 111951458
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Entry
111951458 CDS
T05762
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111951458
Proteoglycans [BR:
salp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
111951458
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
111951458
NCBI-ProteinID:
XP_023825323
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Position
LG24:complement(11408275..11412501)
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AA seq
360 aa
AA seq
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MDSCHFLKGSCSVVPSTVMFPLRVPIFAVLVSLTVGQYDDYDYQPASQHGPSSANCAQEC
ECPINFPTAMYCDSRNLKFVPIVPSGIKYLYLQNNLIEEIKAGVFDNVTAELRWLVLDHN
QITNDKVAKGTIDKLTGLHKILFSFNKLTEAVIPPSXSLDELKMMNNQLSKFPAGSLAGM
QNLTSVHLZNNELTSKALNGVFKGLNKLVAIDLTNNKLKKLPSGMXSSLEXFYGDHNDIS
SIAAGDLKELPKLAYLRLAYNQMTDAGIPAGVFNVTSLIELDLSYNKLQSIPEINEQLEH
LYLQVNEINKFNLENICKFSGPLNYSRLKHLRLDGNNITHADLPHDSSNCLRQASDIIFD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggactcttgtcatttcctgaagggttcctgctcggttgtccctagtacagttatgttt
cccctccgtgtccccatctttgccgtgctggtcagcctgaccgtgggtcagtacgatgac
tacgactaccagccggcttcccagcacggcccgtccagcgccaactgtgcccaggaatgc
gagtgccccatcaacttccccactgccatgtactgtgactcccgcaaccttaagtttgtg
cccattgtgccttcaggcatcaagtacctgtacctgcagaacaacctgatcgaggagatc
aaggctggggtcttcgacaacgtcacggctgaactccgttggctggtcttggaccataac
cagatcaccaatgacaaggtcgccaagggaaccatcgacaagctgaccggacttcataag
atcttgttcagcttcaacaaactgacggaagctgtgatccctccctccawytccttggac
gagctgaagatgatgaacaaccagctgtccaagttccccgcagggagtctggccggcatg
cagaacctgacctcggtccacctcsagaacaacgagctgacktctaaagctcttaacggg
gtcttcaagggcctcaacaagctggtggccatagacttgaccaacaacaagctgaagaag
ctmccctcaggcatgrccagttcgctggagyrcttctatggcgatcacaatgacatcagc
agcatcgcagctggggacctcaaagagctgcccaagctggcgtacctgaggttggcctac
aatcagatgacggatgcagggattccggcgggcgtgttcaatgtgacgagcctgatcgag
ctggatctgtcctacaacaagctgcagtccatccctgagatcaacgaacagctggagcat
ctctatctgcaggtcaacgaaatcaacaagttcaacctggagaatatttgcaagttctct
ggccctctgaactactccagactgaagcacctgcgtctggatgggaacaacatcacacat
gccgacctaccccatgactcctccaactgcctgcgccaggcctccgacatcatcttcgac
taa
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