Salvelinus sp. IW2-2015 (Arctic char): 111951464
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Entry
111951464 CDS
T05762
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111951464
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111951464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_19
TPR_11
TPR_BSK1_C
TPR_16
TPR_12
ARM_TT21_4th
ANAPC3
TPR_7
Motif
Other DBs
NCBI-GeneID:
111951464
NCBI-ProteinID:
XP_023825329
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All DBs
Position
LG24:complement(9333471..9338687)
Genome browser
AA seq
672 aa
AA seq
DB search
MMSWRRTQTENDSMVGMSENKSIELQLQMRQNAEDLHNFMKDLDSWETDIKRKDEQLRTG
SVGESQKSVPPVRNKGYKKKREKKKASDNNAKTEPKQARRIKSHDYQSWDKFDVDKVLES
MDKEDSAAESNDSESEDSGVPATDQDKVLAEKEKGSQLFKEGKYDDAIECYTRGMGADPY
NPVLPTNRAACFFRLKKFAVAESDCNLSIALDSNYFKAFARRGASRFALQNYESALEDYV
MVLKLDPGNLEAQNEVMKCKEVIAKLGGKAESPEAAVDVKQQQLMEEQQRRQEAVVQKDR
GNAYFKEGKYEAAVEYYTKGMKADSTNVLLPANRAMAYLKLQRYKEAEEDGSKAIALDGT
YSKAFARRGTARAALGLLKQAKEDFEEVLKLEPGNKQAFHEMKKIAIDMGTSGLLATEEH
AQRRTVQPINKPPHLQSTKPLSRVDIEEVCGKILVQEESSAVLTSTTAPRVRPQKTTSIA
DTXREGQASPPSTSPSAKILKIEETSNVPSHSPVKGPEGYAVRAQTQQHREATVSEPTEP
PATPSTELVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQ
ILRTLQSFYIKNEEPPVMLEILRNLAGVRRFDMAVMFMSNAEKKVLQELFDFLRQAGLED
ASVGALQXKYGV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatggcgccgaacacaaacagaaaacgacagtatggtaggcatgtctgaaaac
aaatccattgaactccaactgcaaatgcgacaaaatgcagaggacctgcataacttcatg
aaagatcttgacagctgggaaactgacataaagaggaaggatgagcaactaagaactggg
agcgttggcgagtctcaaaaaagcgtcccaccagtgcgaaacaagggctacaaaaagaag
agggagaaaaagaaggcatcagacaacaatgcaaagactgaaccaaaacaagcacgcagg
ataaagtctcatgactatcagtcatgggacaaatttgatgtggacaaggtattggagtcc
atggataaagaggacagtgctgctgagtccaatgactctgagtctgaggattctggggtt
ccggctactgaccaagacaaggtgcttgctgagaaggagaaaggtagtcagctgttcaaa
gaagggaagtatgatgatgccattgagtgttacaccagaggcatgggtgcagacccttat
aaccccgttctgcctacaaaccgagctgcctgcttcttcagactcaaaaagtttgctgtt
gccgagtctgactgcaacttgtccatcgctctggacagtaactacttcaaagcatttgca
cgaagaggagcgtctcgattcgccctgcaaaattatgaatctgccctagaagattatgta
atggttctcaagctggatcctggaaacctggaggcacagaatgaagtgatgaaatgcaaa
gaggtcattgctaaactgggtggaaaggcagaaagcccagaggctgcggtggatgtcaag
caacagcagctcatggaggaacagcagaggagacaggaggcggtggtgcagaaagacagg
gggaatgcatacttcaaagaggggaagtatgaggcagcagtagagtactacaccaagggc
atgaaagcggacagcaccaacgtcctcctgcctgccaaccgggccatggcttacttaaag
ctgcagagatataaagaggctgaggaggacggcagtaaagcaatagccctggatggcacc
tattcaaaggcctttgcccgcagagggacagccagggctgctctgggactgctcaaacaa
gctaaagaagattttgaggaggtcctgaagctggaaccaggaaacaagcaggcatttcat
gagatgaagaagattgcaattgacatgggcaccagtggtctgctggcaacagaagagcat
gcacagcggagaacagtacagccaattaacaaaccacctcacctgcagtcaaccaagcca
ttgagtagagtggacattgaagaggtttgtggaaagatcctggtccaggaggagtcctcg
gctgtgttgacttcaaccacagccccccgtgttaggccccagaagaccacctccattgca
gacaccktgagagagggtcaggcctcacccccctctacctcccccagtgctaagatcctg
aagattgaagaaacatcaaacgtcccctcacattcccctgtcaaagggcctgaggggtat
gctgtgagagcacagacacagcagcacagggaggcaactgtcagtgaaccaacagaaccg
cctgctacaccctcaactgagctcgtacctcctgcccccaccaacagcttccagctagag
gcagacctaaggaagattggaaatggccctgaagttatctacaagtatttgaagcaaatc
cagcctcaggcttacgcaaagatcttccagagctctcttgaaccagacatgctcaatcag
attctaaggacgttacaaagcttctacatcaagaatgaagagccacctgtcatgctggag
atcctcaggaatctggccggtgtgaggcggttcgacatggctgtcatgttcatgtccaac
gctgagaagaaagttctacaagaattgtttgactttcttcgtcaagctggacttgaggac
gcttcagtaggagccctgcaaaakaagtatggagtgtga
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