KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111951717
Entry
111951717         CDS       T05762                                 
Symbol
cfap43
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 43
  KO
K24223  cilia- and flagella-associated protein 43
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:salp03037]
    111951717 (cfap43)
Cilium and associated proteins [BR:salp03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   111951717 (cfap43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WDR55 Beta-prop_EML WD40_Prp19 WD40 Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_Aladin CFAP43_N Beta-prop_ACSF4 CFAP251_N Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 111951717
NCBI-ProteinID: XP_023825692
LinkDB
Position
LG25:15885917..15900248
AA seq 1707 aa
MLAVSCLAQXSLFSTFPEMDVLGNLEVRWAQGLTSQNVEFVDKKTACYICGNYIVFLNIE
TNIRSVLQCPGRGIGAFTANGHCRTLAFSNHKLNPSIFVYNYPELILKNELKGTAHVDYT
SLALSDAGPYLACCSSIPDHTITVWNWETGDPICNQPQAGKDITSLVFNPMNWLQICSLS
ASSSLTVWNIEKSDSFHIMKPGVIDLPATDGCLVEREINPSHVPTGILTYFGPQMPTSAI
AGLAEDKAETFVPKECIKTRLRPSTICWTASSELYVGCQEGHLLQVDPDSLAVSVLFNPS
AADDIPGFQQGSFQSLALHKDGLFVSGKENVLRCLKIKGNQVEVTQTWTLEEPATTIIYS
PDYETLLLASSTGRIYRYKRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQ
LWSLDAGFCIGSISLQVKVTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHSVHLY
HTPVDHLLFDQGGNFLITGASDANIYVLNARASREFEVIGYTGAKGAIVSLSTQYSRDIK
QVKLLALCAGEKDIGRGEGSLLTLLTLPVQELNRMEFVYCCCFAGAGVCADLRGCLSNNV
LQRCTYEVPHALSSSALGANKIFGYCQKRKALQRFQLPESTEWSSDQEVVQLTPEKEVEG
HPMGPASVLLSPHQSWLASVGQDGLLRIREISSLDRYVQMQCHSCWLGGVRTVSFTSDSQ
TMITTGLKDGSMVCTRLRLKMAGVGKANAATQYSQSIAKYQESVITSENPILSRMADWDP
EALSPPGSADLHRAEANDKRQIVDVTEQDESSTNLPSATASDSTWLDNKLKAVINEEIQQ
FSQTKKSLRKNIKQLRDTIQAMMRENETLPDMEKLEQQEFNLDVDEQKRLQAEGEQEVTR
VRNEIELENLAKCYLRDVLKRECWDSMKIKGQAIKAFHTEHEVKNYPMKERTQQELDELH
RVESMRKIERADSNLQQEILEKNSKTTAEEEEEEEGHEMESASLTGSLSAQYGGSNPYLY
NQFNLHIREQKINQITLLQDVIYKVKTAFNTDFKGVHKQKEQEINRVKDKNRRIMEIMSE
LDLKRKLWEPSLSDNERPERALSVEDSEIHFEKYLTPEQRTKEEEKKKEEEQRRQTAKSD
NIRERALDEMMGGVLELKKEDILRVEVPQPEFIVSKPDIQWTEEEKKXYKEYEKKAKELS
EEQEKYRKTLEAEMKKLQTSIMDSTQGFDETLTKLFERKVKSEMVIYQEELKITNLVHSI
LIEEEVLNRERELSLKLEKNRVYKNEIGEELKKHKEDVEMFRETYDNVVAEDKLLDRGFR
KEFFDVPGHVVDQLYKLYKRRPRVQRMRTQADNSTSPFKERPLPGPVAAEGLCQMMKAME
ELDAPENMPESLDLSVWERFCLARRAKVESEQQVKVKALTLAEMQAFLQKRTDEDESARL
EMKSLMDDINGLREEKMRFRLDIMVQILIKQGQVEMENGDFIADYSDSLLLHKSVVEDLN
GTIRALGEQKIASMVECKDFRKGIIQQEWEHKRMRMQKEDLNNKARDIQMLRVSQELQEY
LSETDHDNRISKQVSTLEKTITLQEKTHQKNVLTCKKLIKQLNRQAAXKAAKNSALDEQL
TNMQVTVAERRHICEAIAMEENHESDAEERYQEIIQRKKLVDLARTQAEEVATLRAEVER
MRMKSFPALAQLKHNXQDLGNTLFTFF
NT seq 5124 nt   +upstreamnt  +downstreamnt
atgctagctgttagttgtcttgcacagcycagtttattcagtacatttccagaaatggat
gtattgggaaatttagaagtcaggtgggctcagggtttgacaagccaaaatgttgaattt
gttgacaagaaaacagcctgctacatttgtgggaattacatcgttttcctgaatatagag
acgaacattagaagtgtgctgcagtgtcctggtcgaggtattggtgccttcacagcaaat
ggacattgcaggacacttgcattctccaaccataaactaaatccctccatatttgtgtac
aactaccctgaacttattctgaagaatgaactgaagggaacagcccatgtagactacaca
tctctggcactaagtgatgctggtccttatttggcctgctgctcatcaataccagaccac
accataacagtatggaactgggaaactggggatccaatttgtaaccaaccacaagctgga
aaagacatcacctctttggtgtttaacccaatgaactggctccagatttgctctttgagt
gcatcatcatcccttacagtttggaacattgagaagagtgacagctttcatataatgaaa
ccaggtgtgatagatctccctgcgactgatggctgtctggttgagagggagattaacccc
tctcatgtccccactggaatactcacctacttcggacctcagatgcccacctcagccatc
gcagggcttgcagaagacaaggcagaaacctttgtgcccaaagagtgcatcaagaccagg
ctaagacctagcaccatctgctggacagcctcatcagagctctatgtgggctgtcaggaa
ggccacctactgcaggttgacccagactctctrgctgtctctgtcctcttcaacccctca
gctgcagatgacattcctgggttccagcagggtagcttccagagcttagccctgcacaag
gatggactctttgtgtcaggaaaggagaatgtgctacgctgcttaaaaattaaggggaac
caagtggaggttacacaaacttggacattggaggaaccagccacaaccataatatattct
ccagactatgaaacactgctcttagcttccagtacagggcgcatctacaggtataaacga
tcccagtgtgagaaggtggtgaaagtcctggacgttctcagtggagactttgtggcagca
gcttcactgtacactgataataacttatgtgtgtcagtgagggactcaggagagttgcag
ctctggtctctagatgctggcttctgcatcggctctatatctcttcaagtaaaggtgacc
agtttggcctgctgtccgattgctcaatacgttgccgtgggaacagtgtcggggcatgtc
ctgttcattgagctgaccagggagcagcagcctcgtctggtgcacagtgttcacctctac
cacactcctgtggaccacctactttttgatcaaggaggaaacttccttatcactggtgcc
tcggatgcaaatatatatgtgttgaatgcaagggcttccagagaatttgaggtaatcgga
tacacaggtgctaaaggagccatcgtgtccctctctacccagtacagccgggacattaag
caggtcaaactgctggctctgtgtgctggagagaaggacataggccgaggggagggaagt
ctgcttacactgctcactctgcctgtgcaggagctcaacagaatggaatttgtgtactgc
tgttgctttgcaggggcaggagtgtgtgcagacctgagaggatgtctttccaataatgtc
ctacagcggtgcacatatgaggtccctcacgcactcagctcctctgccctgggagccaat
aagatctttggctactgccaaaagagaaaagctctccagagattccagctacctgagagc
acagaatggtcctctgaccaggaagtggtccagttgaccccagagaaggaggtggagggt
caccctatgggccccgcctctgtcctcctgtcgccccaccagtcttggctggcctckgtg
ggccaagacggactgctgcgcatccgagagatctccagtctagaccggtatgttcagatg
cagtgccactcgtgttggctgggaggggtgaggacagtgtcctttacctcagacagtcag
acaatgatcactacaggcctgaaagacggctctatggtctgtacaagactaaggctgaaa
atggcaggtgttggcaaagcgaatgcagctacacagtacagccagtctatagccaaatac
caggagagtgtgataacatcagagaaccctattctcagtaggatggctgactgggaccca
gaggccctgtcccctcctgggtctgcagatctacacagagcagaggccaatgataagcga
cagatagttgatgtgacggaacaggatgagagctccaccaacctgccctcagccacagcc
tcagactccacctggctggacaacaagctgaaagcggttatcaatgaggagatacagcag
ttttcacagacaaagaaaagcctgaggaaaaatatcaaacaattgcgtgacacaatccag
gcaatgatgcgtgagaacgagacgctgcctgacatggagaagctggagcagcaggagttc
aacctggatgtagatgagcaaaagagattgcaagccgagggggagcaggaggtcaccagg
gtccgaaatgagattgagttggagaacctagccaagtgttacctgcgtgacgtccttaag
agagaatgctgggattccatgaagatcaaagggcaagctatcaaggccttccacactgaa
cacgaggtgaagaactaccccatgaaggagcggacacagcaggagctggatgaacttcat
agagtggagagtatgaggaagattgaacgggctgacagtaatctccagcaggagattcta
gagaagaatagcaagaccacggcggaagaagaggaggaggaggaaggmcatgagatggag
agtgcttccctcacaggtagcctcagtgcccagtatggaggctcaaacccctacctctac
aatcagttcaacctgcacatcagagagcagaagatcaaccagatcactttgctacaggat
gtcatctacaaagtgaagacagcctttaacacagactttaagggggtgcacaagcagaag
gagcaggagattaaccgagtgaaagataagaatcgtcgcatcatggagatcatgtcagag
ctggacctcaagaggaagctgtgggagcccagcctgtctgacaacgagcggccagagagg
gcactgtctgtggaggactctgagattcattttgaaaagtacctcaccccagagcagaga
acaaaagaggaggagaagaagaaagaggaggaacaaagacggcagacggccaagagtgac
aatatcagagagcgagctctggatgaaatgatgggtggagtactcgagctaaaaaaagag
gacatcttgagagtggaggtgcctcagcctgagttcattgtatccaaaccggacattcag
tggacagaggaagagaaaaagakttataaagagtatgagaagaaagccaaagaactgagc
gaggaacaggagaagtacagaaagactctggaagctgaaatgaagaaactacagacgtcc
atcatggactccactcaggggtttgatgaaaccttgaccaagctctttgagaggaaggtg
aaatctgagatggttatataccaggaagagctgaagattacaaatctagttcactccatt
ctgatagaggaggaggttctcaatagagagcgagaactcagcctcaagctagaaaaaaac
agggtctacaagaatgagattggagaagagcttaagaagcacaaagaggatgtagaaatg
ttccgggagacctacgacaatgttgtggccgaggacaaacttctcgacaggggtttcagg
aaggagttctttgatgtcccaggccatgttgttgatcagctgtacaagctatacaagcgc
agacccagggtccagaggatgaggacccaggcagacaacagtaccagcccctttaaagag
cggcccctgccgggcccagtggcagcagagggtctctgtcagatgatgaaggccatggag
gagctggacgctccagagaacatgcctgaaagcctagacttgtctgtgtgggagaggttc
tgcctggcccgcagagccaaagttgagagtgagcagcaggtgaaagttaaggctttgact
ctggctgaaatgcaggcctttctgcagaaaaggaccgatgaggatgagagtgcaagactg
gaaatgaaaagtctcatggatgacatcaatgggctacgagaggagaagatgcgtttccgc
ctggacatcatggttcagatcttgatcaagcagggccaggtggagatggagaacggagac
ttcattgcggactactctgactctctgctgctccataagagtgtggtggaggacctcaac
gggaccatcagagctctaggagagcagaagatagccagcatggtggagtgcaaggacttc
cgtaagggcatcatccagcaggagtgggagcacaagaggatgagaatgcagaaggaggac
ctgaacaacaaagccagggacattcagatgctgcgagtctctcaggagctgcaggagtat
ctcagtgagacggatcatgacaaccgcatatcaaagcaggtttcaactctggagaaaacc
ataacattacaggaaaagactcaccaaaagaatgtgctgacttgtaagaagttgatcaag
caactgaacagacaggcagcartgaaggcagcgaagaattctgctctggatgagcagctg
accaacatgcaagtgactgtggctgagaggaggcacatctgtgaagccatagccatggag
gagaaccatgagagtgatgcagaggagaggtaccaggagatcatccagaggaagaagctg
gtggatctagccaggacccaggctgaggaggtggctaccctcagggcagaggtggaacgc
atgaggatgaagtccttccccgctctcgctcagctaaaacataactracaagatttagga
aacactttatttacatttttttaa

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