Salvelinus sp. IW2-2015 (Arctic char): 111951756
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Entry
111951756 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111951756
04082 Neuroactive ligand signaling
111951756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111951756
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111951756
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111951756
NCBI-ProteinID:
XP_023825722
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Position
LG25:complement(7048272..7126700)
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AA seq
462 aa
AA seq
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MMAVLRSGGRVFIMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATILLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNINDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
AENNRAKXRKEKAAADEAALAPTGDLELCPSSPTGSEPKPEAPEEPPNRCLIVLVFLRKV
LRKAANCCHVENPHLIDNYSRMTFPLSFVFVNLLYWTYYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgctccgctcgggagggagagtgttcatcatgctcctcattagcaggatg
ttagagaactcgctgctcagcgctgaagtgaaagagggagagattctgccmcccaccatt
cagaagctgatgaaaggatacaacaagtacctcaggcctttttttgacaatgggccagtg
actgtgggcatgagtttggacattgccagcattgacaccatatcagagatcaacatggac
tacacggccactatcttrctgcgtcagcgctggacagacgagcgcctggtgtttgagggt
aacaagagcctgagtctggacggcaggctggtggagctgctctgggtaccagacaccttc
atcgtagactccaaaaagtccttcctccatgacatcactgtggagaacaggctgatcagg
atcttccccaatggaacggtgctctacgccctgaggatcaccaccactgtggcctgcaac
atggacctgaccaagtaccccatggacaagcagacctgcactctgcaactggagagctgg
ggctacaacatcaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggt
ttggatacgctgcgtctggctcagtacacagtagaggaccactacacctctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtacgttccctccagcctgctggtggtcctctcctgg
gtctctttctggatcagccagtcttccgtccccgcaaggatctgtatcggagtgaccacg
gttctgaccatgaccacgttaatgatgggtgccaggacgtccctgcccaacgccaactgt
ttcatcaaagccatcgacgtgtacctgggcatctgcttcagcttcatcttcggagccctg
atcgagtacgccgtggcccacttctgcacccttaaccatcccgacgccaacattgtcatg
tacggtcaccagatgggaggctttgacgaggagatgaacggcatggtcaccaccatcgcc
gctgaaaacaacagggccaagkggcgtaaggagaaagctgctgcagatgaggcggcctta
gcgcccacaggtgacctggaactttgcccctccagccccactggcagtgagcccaagcct
gaggcccctgaggagccccccaaccgctgcctcattgtcctggtcttcctccgcaaggtc
ctgcgcaaagctgcaaactgttgccatgtggagaatccccacttaatagacaattactcc
aggatgaccttccccctctcctttgtatttgtcaacctcctctattggacatactacctg
tacttgtaa
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