Salvelinus sp. IW2-2015 (Arctic char): 111951877
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Entry
111951877 CDS
T05762
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111951877
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111951877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111951877
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111951877
Intermediate filaments
Intermediate filament-binding proteins
111951877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
Motif
Other DBs
NCBI-GeneID:
111951877
NCBI-ProteinID:
XP_023825942
LinkDB
All DBs
Position
LG25:complement(22061893..22196210)
Genome browser
AA seq
2360 aa
AA seq
DB search
MELQRATSMPGPLSPGHLSPGSHSPGALSPSSGPGPSLASSPGPDPGYSAKQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
IRVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLID
FDKLKKSNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEK
SEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARR
TRLEMNLGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
NRVKAVNNNAQXFAIDAEGYKPCDPQVIRDRVAHMEFCYAELSQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQG
EELVAADHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQADADDIDAWML
DVLRIVSSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPXEQTGSEEVQ
GRLXGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKL
EDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFR
DLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGM
ERDLAAIEDKLGELGKEGECLATEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEA
SKLQQFLRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEXIKNEIRNYEEDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKIKAVVDTGRRLVSDGNA
NADRIQEKVDSIDERHKKNRMVASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLMAEKPETESMVKEKLAALHKM
WDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKK
QQMLESQVDVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNL
MASREIHQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRC
DDIFERGQQVLKDDDDSLSGEGIHQRLADLRRLWAQILEETGKRHGRLEEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTA
AGHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWK
DGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEAC
DGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNNSFTNCIELGKSLLARRHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVH
QFGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRQQEEEERKRNPPPAETQTDDTSPQQREGEQVSLNGLPSDQDSPRDNGEESD
IVNGVEEPSPGGSPSEARKVMPSQAATLPAKSQDSAPANQMEGYLHRKHEWEGHNKKASS
RSWHNVYCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAACEVALDYKKKKHVFKLKA
TDGNEYLFQANDDEEMNSWMQAISXAASSDKTEMTPSSHSTPASSRAQTLPASVALATES
SPGKREKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagtatgcctggccccttgtccccagggcatctctctcca
gggtcccactccccaggggccctgtccccttcttctgggcctggcccctctctagcctcc
agccctggccctgatccgggctactccgctaaacaggctgccttcaactacaaccagctg
gagggccgttttaagcagctgcaagatgagcgcgaggcggtgcagaagaagaccttcacc
aagtgggtcaactcccacctagccagagtgtcctgcaggatcactgacctctatatggac
ctgagggatggacgcatgctcatcaaactactggaggtcctctctggggagagactgccc
aagcccactaaggggcgcatgcgtatccactgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagagggtccatctggagaatatgggctcccatgacattgtcgacggc
aaccaccgcctcaccctcggcctaatctggaccatcatcctccgcttccagatccaggac
atcagagtggagacggaggacaacaaggagaagaagtctgctaaagatgccctgctactg
tggtgccagatgaagactgcaggatatcccaacgtgaacattcacaacttcagcaccagc
tggagagatggcatggccttcaacgccatcctccacaaacacagacctgacctgatagac
tttgacaagctgaagaagtccaacgcacaccacaacctgcagaatgccttcaatctggca
gagcaacacctgggtatccacaagctactggacgtagaggatatcagcgtggaccacccg
gatgagaagtccgtcatcacctatgttgtgacctactaccactacttctccaaaatgaag
gctctgaaggtggagggaaaacgtattgggaaggtgctggacaatgccattgagacagat
aacatgattcagaaatatgagagtctggcctctgacctcctggaatggattgaacagacc
atcatcatcctcaacaaccgcaagtttgccaactccttagtgggggtgcagcaacagctt
caggccttcaacacctaccgtaccgtggaraagccccccaagttcacagagaagggcaac
ctggaggttctcctcttcaccattcaaagtaagatgagggccaacaatcagaaggtttac
atgccacgagatggcaaactcatctcagacatcaacaaggcctgggagaggctggagaag
tcggagcatgagagggagctggcactgaggacggagctgattcgtcaggagaaactggag
cagctggcccgccgcttcgaccgcaaggccgccatgagagagacatggctgagtgaaaac
caacgcctcgtctcgcaggacaactttggcttcgacctgcaggcagtggaggctgccacc
aagaagcacgaggccatcgagacggacatcggcgcctacgaggaacgtgtgcaggctgtg
ctctctgtggccaaggagctggaggcggagaactaccacgacatcaagcgcgtgactgcg
aggaaggacaacgtgctgcgtctgtgggagtacctgctggagctgctgaaggcccggcgc
acccgtctggagatgaacctgggcctgcagagggtcttccaagagatgctccacatcatg
gactggatggacgagatgaagatgctgctgctgtcccaggactatgggaaacacctgctg
ggagtggaggacctgctgcagaagcatgctctggtggaggctgatatcgccatccaagcc
aaccgcgtcaaagccgtcaacaacaacgctcagaaktttgccatcgatgcagagggctac
aagccctgtgaccctcaggttatccgggaccgcgtggcccacatggagttctgctacgca
gagctgagccagctggccgccgagcgctgcgcccgcctggaggagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgggagaaggaacaaatcctg
tcctcggaggactgtggcaaggacctgacgggcgccgtgcgcctgctgagccagcatcgc
gccttcgaggacgagatgagcggtcgcgctggccacttgcagcagaccatcaaacaggga
gaggagctggtggccgcagaccacttcggagccgacaagatccgcaaacgcatccaagac
atccaggcgcagtgggcggccctggaggggctgtctgcagtcaggaaggcccggctggag
gaggcctgcaacctgcaccagttccargctgacgcmgacgacatcgacgcctggatgctg
gatgtwctccgcatygtgtccagtgccgacgtkggccacgacgagttctccacccaggcc
ctggtcaagaagcacaaggacgtggccgaggagatcaccagctaccgaccagtcatcgac
gccctgcacgagcagtccaaaaccytrcccrrggarcagactggctcagaggaggtgcag
gggcgcctgkcaggcatygargagcgctayaaggaggtggctgagctgacccggctgagg
aagcaggccctrcaggatgccctggccctctacaagatgttcagcgaggcggacgcctgt
gaggtgtggatcgatgagaaggagcagtggctcaacagtatggagataccagagaaactg
gaggatctggaagtggttcagcacaggtttgagagtctggagccagagatgaacaaccaa
gcatcccgcgttgccgtggtgaaccagattgctaggcaactaatccacagtggtcacccc
agtgagaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgt
gacctagttgacctgaagaaagactccctcaactcagctctgggcgtgcagaactaccac
ctggagtgcaatgaaaccaagtcgtggatccgtgagaagaccaaggtgatcgagtccacc
caggagctgggcaacgatcttgccggggtcatggccctacagcgcaaactcaccggcatg
gagcgtgacctggctgccatcgaggacaagctgggagaactggggaaggagggggagtgc
ctggcractgagcaccctgaccaggcccagggcatcatgggtcgtctgggggagatcaca
ggggtgtgggatgagatgaagggcaccttgaagaatcgcgaggagtctctgggagaggcc
agcaagctgcagcagttcctccgggagctggatgacttccaatcatggctgtccaaaacc
cagacggccatcgcctcagaggacatgcccaacacactgacggaggccgagaagcttctg
gcgcagcacgagrgcatcaagaacgagatccgcaactacgaggaggactaccagaagatg
agggacatgggcgagatggtgacccagggccagactgacgcccagtacatgttcctgagg
cagaggctgcaggccctggacacgggctggaacgagctgcacaagatgtgggagaaccgt
cagaacctactgtcccagtcccatgcccaccagctgttcctcagggacaccaagcaggct
gaggccttcctcaacaaccaggagtatgtgctggcccatactgagatgcccacgactctg
gagggggcagagggagccattaagaagcaggaggacttcatgaccaccatggacgccaac
gaggagaagatcaaagctgtggtggacaccggacgcaggctggtcagcgatggaaacgcc
aacgctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgc
atggtggccagtgagcttctctgtaagctgaaggataacagagacctgcagaagttcctc
caggactgccaagagctctccctgtggatcaatgagaagatgctcacggctcaggacatg
tcgtacgacgaagccagaaacctccacagcaaatggctcaaacaccaggcgttcatggcc
gagctgcagtccaacaaggagtggctggacaagatcgagaaggatggaatgcagctgatg
gctgagaagccggagacagagtccatggtgaaggaaaagctggcagcgctccataagatg
tgggatgacctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaag
gccgagctgttcacccagagctgtgccgacctagacaagtggctggtaggagtggatgga
cagatccaatcagacgactatggcaaagatctgaccagtgtcaacatcctgctcaagaaa
caacagatgctggagagccaggtggacgtgcgtcagaaggaggtggaggagctgcagagc
caggcccaggtcctcagccaggagggtaaggatacggacgaggtggacggccagcgccgc
atcgtggagaagaagttccagcagctgctggaccctctacggaagaggaagggaaacctc
atggcctcccgcgagatccaccagttcaacagagacatggaggacgagattctctgggtt
gaagagcgaatgccacttgcaatatcaacagaccacggaaacaacctgcaaactgtccag
ttactcatcaagaagaaccagaccctgcagaaggagatccagggccaccagccccgctgt
gatgacatctttgagcggggccagcaggtcctcaaggatgacgacgacagcctcagcggc
gaggggatccaccaacggctggccgacctgcggcgcctgtgggcccagattctggaggag
acgggcaaacgccatggacgcctggaggaggcccacaaggcccaacagtactactttgat
gctgctgaagccgaggcctggatgagcgagcaagagctctacatgatgtcagaggagaaa
gccaaggatgagcagagctctgtggccatgttgaagaagcaccagatactggagcaggct
gtggaagactacgctgaaactgtccaccagctgtcccagacaagtagaggcttgacggcc
gccggacaccctgaaagtgagcggatcggcatgcgtcagtcccaggtggataagctgtac
gcggggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctg
ttccagctcaacagggaggtggatgacctggagcagtggatcgctgaaagggaagtagtg
gctgggtcacatgagctgggacaggactatgaacatgtcacgatgcttcaggagcgtttc
cgtgagtttgctcgcgacacgggcaacatcggtcaggagcgtgtggacactgtcaaccag
ttggcggacgagctcatcaactcgggccacaccgacgcagcaacaatcgcggagtggaag
gacgggctgaatgaagcgtgggccgacctgctggagctaatcgacacacgcacgcagatc
ctggcggcgtcctttgagctgcataagttctaccatgacgccaaggagatcctcaaccgc
atcctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggag
accctgcagaggatgcacaccacctttgaacacgacatccaggccctggggacacaggtg
agaacgttgcaggaagatgctgtgcgtctgcagtctgcctacgccggagacaaggctgat
gacatccaaaagagagagggtgaggtgctggaggcctggaggaccctgctggaagcctgc
gacggccgcagggtcagactgctcgacaccggcgacaagtttcgcttcttcagcatggtg
cgagacctcatgctctggatggaggacgtcatccgcctcatcgaggctcaggagaagccc
agggacgtgtcgtccgtggagctcctgatgaacaaccaccaaggcatcaaggctgagatc
gacgcccgcaacaacagcttcaccaactgcattgagctgggcaagtccctgttggcaagg
agacactatgcattagaggagatcaaagagaagttactacagttgacagacaaaaggaaa
gacatgattgacaagtgggaggacagatgggagtggctaagattggttctggaggtgcac
cagtttggtagggatgcgggtgtggccgagtcatggctgctgggacaggagccgtacctg
tccagcagggagatgggtcagaacgtggacgaggtggagaaactcatcaagagacacgag
gcctttgagaagtccgctgccacctgggaggagcgcttctcagcgctggaacggctgact
acgatggaattactggaagtgagaagacagcaagaggaggaagagaggaagaggaatccg
ccacctgcagagacccagacggacgatacatcgccacagcagagggagggtgagcaggtg
tctctgaatggactgccatcggaccaggactcccctcgggacaacggagaggaaagtgac
atcgttaatggggtggaggagcccagcccaggtgggtcgcccagtgaagcacgcaaggtc
atgcccagccaggctgccacactcccggccaagtcccaggactcagccccagccaaccag
atggaaggatacctgcaccgcaaacacgagtgggagggtcacaacaagaaggcatccagc
agatcctggcacaatgtgtattgcgtgatcaacaaccgggagatgggcttctacaaagac
cataagagtgccagccaggggatcccttaccacaaccagatccccatcagcctgaaggat
gctgcgtgtgaggttgccctcgactacaagaagaagaaacatgtgttcaaactgaaagct
acagatggcaatgagtatctcttccaagccaacgatgatgaggagatgaactcgtggatg
caagccatctccakcgctgcgtcctctgataagacagagatgacccccagcagccatagc
acccccgcctccagccgagcccagaccctgcccgcctccgtcgccctggcaactgagtcc
agccctggcaagcgtgagaaggacaaagaaaagcgcttcagccttttcagcaaaaagaaa
tag
DBGET
integrated database retrieval system
