Salvelinus sp. IW2-2015 (Arctic char): 111951944
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Entry
111951944 CDS
T05762
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111951944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111951944
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
salp04031
]
111951944
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
111951944
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
111951944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
Raptor_N
TniB
Motif
Other DBs
NCBI-GeneID:
111951944
NCBI-ProteinID:
XP_023826085
LinkDB
All DBs
Position
LG3:19164548..19169222
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHRIVFLL
VGHKCDLEPQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFQLVRGGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggttgtaccagttcagactcatcgtcattggggactcgacggtgggg
aaatcgtgtttgatccggcggttcacagagggacgcttcgcccaggtgagcgacccaaca
gtcggcgtagatttcttctctcgcctggtggagatcgagccggggaaacgcatcaagcta
cagatctgggatacggcgggacaggagcgcttcaggtccatcaccagagcctactatcgt
aactcggtgggcgggctcctcctgtttgacatcacaaaccgccgttccttccagaatgtt
catgattggctagaggaggcccggagccacgtccaaccacacagrattgtgttcctattg
gtcggccacaagtgtgacctggaacctcagcgccaggtaactcgtcaggaggctgagaaa
ctcgccggcgcctacgggatgcgttacgtagaaacttcggcccgcgacgccataaacgtg
gagcacgccttcacggagctgaccagggacatctttcagctggtgaggggcggtgacatc
actatccaggagggctgggagggggtgaagagcggcttcgttcccaacgtggtccactcc
tccgaggaggtcaccaagagcgaccgacgctgcttctgctga
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