Salvelinus sp. IW2-2015 (Arctic char): 111951949
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Entry
111951949 CDS
T05762
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03430
Mismatch repair
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111951949 (mlh1)
03460 Fanconi anemia pathway
111951949 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111951949 (mlh1)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111951949 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111951949
NCBI-ProteinID:
XP_023826087
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Position
LG25:complement(4339942..4360645)
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AA seq
724 aa
AA seq
DB search
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNTISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLAPPTANPNGQSRGEPVTINDMEEMDN
XEILEEQAPGATEDGEGTSLNTPADLPRKRPRAGQDEEQEDRTAAAATRRRAIKLSSVKE
LRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYDF
GNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFSM
EIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECCQFYSIRK
QYVLELEPGEEEQDAELNSWRWKVEHLLFKAFRSLFSPPKHFSEDGSVLQIANLPDLYKV
FERC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagag
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagacgccaag
tccaccaacatacaagtgactgtgaaggagggcggtctgaaacttatccagatacaggac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacaccatctcaacctatgggttcagaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgtgatgggaaactcaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcaccgcggaggatctgttctacaacgtgtccaccaggagg
aaagccctaaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gctatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcggac
gtcaggaccctacccaacgcctccatactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagctcgcctataaactgaag
ggccacatctccaacgccaactactcagtgaagaagtgcattctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccaccctaccaaacacgaggtgcacttcctccacgaagactgtatcatc
gagagcgttcaaaaacacatagagagcaaactcctgggctccaactcctcgcgcacgtac
ttcacacagacattgctacctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacaggggacagtgagcgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcatctaagctggcccctcccaccgccaac
cctaatgggcagagcaggggggaacctgtgaccatcaatgacatggaagagatggacaat
gkagagatcctggaggaacaggcgccaggtgccacagaggatggggagggkaccagccta
aatactccagctgatctccccaggaagcgtccgcgtgccggtcaggatgaggagcaggag
gaccggactgctgcagccgcaaccaggagacgagccatcaagctgagcagtgtgaaggag
ctgagagatgacatcgctgagcacgcacacaaaggtcttcaagagatgcttcagaatcac
tcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactgtac
cttctcaacaccactaaactcagccaggagctattctaccaaattttgatctacgacttc
ggtaactttggcatcttgaggttatctgagcctgcaccgctctatgacctggccatgctg
gctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctggcc
caatacatagttgacttcttgaagaagaaatctgagatgctggaggactacttctccatg
gagatagaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacccct
cctatggagggtctgcccatgttcatcctacgtttggctaccgaggtgaactgggacaat
gagaaggactgcttcagagacttcagcaaggagtgctgccagttctactctatcaggaaa
cagtatgtcctggagctggagccgggagaggaggagcaggatgcagagctgaactcgtgg
cgttggaaggtggagcatctcctgtttaaagccttccggagcctcttcagtccccctaaa
cacttcagtgaggatggcagcgtactccagattgctaacctaccagacctctacaaagta
tttgagcgatgctaa
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