Salvelinus sp. IW2-2015 (Arctic char): 111952071
Help
Entry
111952071 CDS
T05762
Name
(RefSeq) tight junction-associated protein 1 isoform X1
KO
K06105
tight junction protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111952071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pilt
Fez1
ATG16
HIP1_clath_bdg
CALCOCO1
DUF745
betaPIX_CC
Exonuc_VII_L
Med9
Wtap
Uso1_p115_C
DUF641
Motif
Other DBs
NCBI-GeneID:
111952071
NCBI-ProteinID:
XP_023826304
LinkDB
All DBs
Position
LG25:complement(9349518..9423219)
Genome browser
AA seq
709 aa
AA seq
DB search
MTSATPARKPYRKAPPQHRESRNSLPSFLEDLSGSTPPAPANTAGPNPPDPCQDSLSDAD
RIKILQQQNEDLRRRLSHTTHKMEAMETEFETSRHYMQGEMGRTRDDLEKMRDKFRRLQN
SYTASQRANQDLEEKLHSLAAISQTWVYALRKVERDKKTTDQEIVELTNKLLDAKNTIDK
LEELNERYRQDCNLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPDKSSQGAQG
QDSDTMSLTPADVVPTSVIARVLEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQAE
AGRGGRENGGPRHSSRVPAQSNQAQELLQQNGMCRSQSSLSADAQPGEEGGGAFEKLNPY
PAPPPPHPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRTV
PNSPAVSDGGWRSGASSSSGGGGQRDPCRTPTQLDTGDPISSQSSPFSSPPQPPSAFASS
GSSEEDLLANWQRMFVEKMAPSSEGTLVNRTSFSSETVKDLERTRTSKPGGGGSHRGALR
GAYSDGEEGSSTRSWTASRESSLDTDTSSMADLRTRRGHYGADFSTEESEQLLMALDNDQ
DHASGDTVSTAITVETSLAEAKMNEFVEETGSVGSSAEERDILPQDFPVIVPRVLAGLED
YTENTPPLPGNSSTTTPGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctaccccggccaggaagccgtaccgcaaggctccgcctcagcaccgcgag
tcgcgcaacagcttgccctcgttcctagaggaccttagtgggagcacgccgcctgcgcct
gccaacaccgctggccccaaccctcctgacccctgccaggactccttatcagatgcagac
aggatcaagatcctgcagcagcagaatgaagaccttcgccggcggctctcccacaccacc
cacaagatggaggccatggagacggagtttgagaccagccgccactacatgcagggggag
atgggtcgcacgcgcgacgacctggagaagatgagagacaagttccgcagactgcagaac
agctacaccgcctcccagagggccaaccaggacctggaggagaagcttcattccctggct
gctatcagtcaaacctgggtctacgcactccgtaaggtggagagggacaagaagaccacg
gaccaggagatagtggagctcaccaacaaactcctggacgccaagaacaccatcgacaag
ctggaggagttgaacgagcgctatcggcaagattgcaatttggccgtgcagcttttgaag
tgcaataagtcccatttcagaaaccacaagtttgcagatctgccctatgagctgcaggac
atggtgaacaagcacatgaaggccagtctgccggataagagttcccagggggcccagggc
caggactccgacaccatgagcctgacgcctgccgatgtggtgcccacctccgtcatcgcc
cgtgtactggagaagcctgagcctctggtgctcaactctgcccagtccagcagcagcgca
ggccgaccccaggcagaggatgtgtttgtgcatgtggacatgacggggccccaggccgag
gcaggaagagggggtcgagagaatgggggtccccgccacagcagcagagtcccagcccaa
agcaaccaggcacaagagctcctccagcagaacggaatgtgtcggagccagagcagcctg
tcagcagatgcccagccaggagaggagggtggtggggcctttgagaagctcaacccctac
ccagccccccctccgccccatcccctctaccccggccgcaaggtgatcgagttctcctcg
gacgacaaggtgaagatccccaagaacagccccctgcccaactgcacctacgcaacgcgc
caggccatctccctcagcctggtgcaaaacgacgaggagaacgagcgccagcgcactgtg
cccaacagccccgctgtgtcggacgggggctggcgctctggggcttcctcctcctcaggg
ggaggggggcagcgtgacccctgccgcacacctactcagctggacacaggagaccccatt
tccagtcagtccagccccttcagcagcccccctcagccccccagcgccttcgccagctca
ggcagctctgaggaggacctgctggccaactggcagcgcatgtttgtggagaagatggca
ccatcctctgagggcaccctggtcaaccgcacttccttcagcagcgagacggtcaaggac
ctggagaggacccggaccagcaagccagggggcgggggatcccacaggggggcactacgg
ggagcctactcggacggggaggaggggtcctccactcgcagctggactgctagccgagag
tccagcctggacactgacaccagcagcatggctgacctccgcaccaggagggggcattac
ggagcagacttctctacagaggagagcgagcagctgctgatggccctggacaacgaccaa
gaccacgccagtggcgacaccgtgtcaacagccatcactgtggagaccagcctggcggag
gccaagatgaatgagtttgtggaagagacagggtctgtaggcagctctgcagaggagaga
gacatcctgccccaggacttccctgtcatagtacccagggtcctggcagggctagaggac
tacacagagaacacccctcccctccccggcaactcctccactaccacccccggccgaccc
ctgaaaagcccaaagaggatgggagtccaccacttgcaccgcaaagacagcctgacccgg
gcacaggagcatggtaacctgctggactga
DBGET
integrated database retrieval system
