KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111952112
Entry
111952112         CDS       T05762                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X4
  KO
K10373  tropomyosin 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04260  Cardiac muscle contraction
salp04261  Adrenergic signaling in cardiomyocytes
salp04814  Motor proteins
salp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    111952112
   04820 Cytoskeleton in muscle cells
    111952112
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    111952112
   04261 Adrenergic signaling in cardiomyocytes
    111952112
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:salp04812]
    111952112
   04147 Exosome [BR:salp04147]
    111952112
Cytoskeleton proteins [BR:salp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     111952112
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   111952112
SSDB
Motif
Pfam: Tropomyosin Laminin_II CCDC39 CLZ TMF_DNA_bd DUF745 Rod_CreS Sec2p PUMA_CC NBP1 ATG16 DUF3450 MscS_porin Lebercilin CC_Bre1 CENP-F_leu_zip HAUS1 ERM_helical FKBP15 Laminin_I SlyX EzrA FPP DUF16 DUF5930
Other DBs
NCBI-GeneID: 111952112
NCBI-ProteinID: XP_023826370
LinkDB
Position
LG26:24856519..24873046
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDVVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKHKAISEELDHALNDMTSM
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaagatgcagatgcttaagctcgacaaggagaatgctttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagctcgag
gatgacgtggtagctctgcagaagaagctgaaggggacagaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgagctggctgagaagaaagccactgat
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctgacaactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtctgagagaggcatgaaggtcattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgtacagag
gagcgcgctgagctttctgaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcactgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgacgacttggaagatgagttg
tatgcccagaaactgaagcacaaggccatcagcgaggagctggaccacgccctcaatgac
atgacttccatgtaa

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