Salvelinus sp. IW2-2015 (Arctic char): 111952114
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Entry
111952114 CDS
T05762
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111952114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111952114
03041 Spliceosome [BR:
salp03041
]
111952114
03032 DNA replication proteins [BR:
salp03032
]
111952114
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111952114
Spliceosome [BR:
salp03041
]
Complex A
U1 snRNP components
Sm proteins
111952114
U2 snRNP components
111952114
Complex B
U1 snRNP components
111952114
U4/U6.U5 tri-snRNP components
111952114
Complex C
U2 snRNP components
111952114
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111952114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111952114
NCBI-ProteinID:
XP_023826377
LinkDB
All DBs
Position
LG26:complement(47427901..47429266)
Genome browser
AA seq
87 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLFIRGVEEEEEDGEMKEA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgctgaatcccaaaccgttcctgaacggtcttactggcaagcccgtgatg
gtgaagctgaagtggggtatggaatacaagggatacctggtgtccgtggacagctacatg
aacatgcagttggccaacactgaagagtatgtagatggagcgttggctggacacctagga
gaggtgcttgtcagatgcaacaatgtcctgttcataagaggagtagaagaggaggaagag
gatggggaaatgaaagaagcttga
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