Salvelinus sp. IW2-2015 (Arctic char): 111952117
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Entry
111952117 CDS
T05762
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111952117
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111952117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
AAA_13
PUMA_CC
DUF16
FxsA
Filament
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
111952117
NCBI-ProteinID:
XP_023826383
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All DBs
Position
LG26:complement(39463801..39595465)
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AA seq
1040 aa
AA seq
DB search
MASDASHMLEXALEQMDDIIAGSKAAAEYTNGLFELGSPGSTGPLQVLQLVEDLRLALEL
QPREEERDTLRAQVPSSTAHMLMDWLDMDRCSERVSVNLCSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLENSLEEHYHKLNSTEEMLQQELLSRTSLETQKLDLMD
EVSYLKLKLVDMDEEQNHNDSSEDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGARKAYDQCPDVGLVGSDVEEFCCRCGGQNGFLQELRFLKSKVDELEGEKSQYE
KKLKATKAEIADLQZMLASKDSAIEGLQSQLVSRGPMTNENPERVEEVYRRQLTDKYQEL
QRLKMGMESLVATNYEKDRHIEELTVLLGQYRKMKEVMALTQVSSEKLLVGSSEEELSGS
LKMRAITHKAHSHIIRSAMSSRGSSPLLVSPSSFQKELDSSCRSIQTSLKTSMVMVSQSD
AGCYYNGEWSQPRMLSSSLEELQSGSLPKHVVVGQPVEPVSENQHVEMNKYQTLPGKLSR
PDMNGDREQYSTPDQLSPDDSEDSEFHLRKSERLDESTLSDLSPLSSGVDSGQQSPVSPE
NKKNHRGIKKLWGKIRKTQSGSLQGEDLEPGEFKRGGLRATAGPRLARAGETLTSVRDLK
TPFSKWTPEQVCCWLEEYGLGQYVILARHWADSGQTLLSASPQDLEKEMGIKNPLHRKKL
QLALKSFSTKLTEKSSELDHIWVTRWLDDIGLPQYKDQFHQGRVDGRMLQYLTVNNLLFL
KVTSQLHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDL
AEYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNILVGSQAQQE
KREFMESSGYTPLSTTAKVRPKKLGFSNFGHLRKKRCDDSTDYICPLEAAQAQAQLQAVV
NGAHRPYSGFRGLSPILDRDPDRREQPSSMLRIIMIGPLYARWRSACWNRTIPPCTLGGG
AQPSADGGDRGDRTADRSSF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggrggccttggagcaaatggatgacatcatt
gcaggctccaaagctgcagctgagtacaccaacggcctgtttgagctgggctccccgggc
agcacgggacccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagagggacaccctgagggcccaggtccccagcagcaccgctcac
atgctcatggactggctggacatggacaggtgctcagaaagggtctcggttaacctctgc
tccccggtgaacaatgagagctatcaggagcggctggttcgcttagagggggacaaagag
tctctggtgctccaggtgagcgtgctcacagaccaagtggaggctcagggagagaagatc
cgagacctggagaactctctggaggagcactaccacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccggacctcattggagacccagaaactggatctaatggat
gaggtttcctacctgaaactgaagctggtcgacatggacgaggaacagaatcacaacgac
agcagcgaggaccagcagaacaaagctgagtgtgtggtaaatctgattagcgagctccag
gagcagatgtgtaggtttcaggaggagatccacacccggatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcaaggcctatgaccagtgccccgacgtgggcttg
gttggctctgacgtggaggagttttgctgtcgctgtggaggacagaatggcttcctgcaa
gaactccggtttctcaagagtaaagtggatgagctggagggggagaaatcmcagtatgag
aaaaaactaaaggccacaaaggcagagatagcagacctacagsagatgctggcctccaaa
gactctgcgattgagggcctacagagccagctggtctccagaggcccaatgaccaatgag
aacccagagagagtagaggaggtgtataggagacagctgacagacaaataccaagaattg
caaaggttgaaaatggggatggagtctttggtagcaactaactatgagaaagaccgtcac
atagaggagctgactgttctcctgggccagtacaggaagatgaaggaggtgatggccctc
actcaagtgtccagtgagaagctcctggttgggagcagtgaggaggaactgagtgggagt
ctgaagatgagggctatcacccataaagctcattcacatatcatccggtcagcgatgtct
tctagaggctcctctcccctgttagtgtctccctcgtccttccagaaagagctggactcc
agctgccgcagtatccagacctccctgaagacgtcgatggtgatggtctcccagagtgat
gctggctgctactacaacggagaatggtcccaaccacggatgctttcaagtagccttgag
gagttacaaagtggatcgttaccaaagcatgtagtggtgggtcaaccagttgaaccggtt
tcagagaatcagcacgtggaaatgaacaaatatcagaccctaccagggaagctgtctcga
cctgacatgaatggggatcgagagcagtattctacaccagaccagctgtcccctgacgat
agcgaggacagtgagtttcacctaagaaagtcggagagactggatgagtccacgctgtca
gacttgtctcccctgtcgtctggagtggactcaggacagcagtcccctgtctctccagag
aacaagaaaaaccaccggggcatcaagaagctctggggaaagataaggaagacccagtct
ggcagcctgcagggagaggaccttgagcctggagagtttaagagggggggactgagagcc
accgccggccctcgcctggcccgggccggagagacattgacctctgtgcgggatctgaag
acgcccttctccaagtggactccggagcaggtgtgttgctggctggaagagtatgggctg
ggccagtatgtgattctggcacgacactgggccgacagcgggcaaaccctcctctctgcc
tcaccacaggatttagagaaggagatggggattaagaatccactgcacagaaagaagctg
cagttggccctgaagtcgttcagcaccaaactgacagagaaatcatctgaactggaccac
atctgggtcacacgttggcttgatgatattggtttacctcagtacaaggatcagtttcac
cagggaagggtagacggcagaatgcttcagtacttgacagtgaacaacctcttgttcctg
aaagtgaccagtcagctccatcacctcagtgtgaagtgtgctatccacgtcctccacgtc
aacaagttcaaccccaactgcctgaagagaaggcctggggatgagaacaagacgtctccc
tctgaggtggttcagtggtctaaccacagggtgatggagtggcttcgctcggtggacctg
gcggagtacgctcccaacctgaggggcagcggggtgcacgggggccttatcattctggag
cctcgttttaactcagacaccctggccatgctgctaaacatcccccctcagaagaccctg
ctgcgacgccacctggccaccaacttcaacatyctggtgggctcccaggctcagcaggag
aagagggagttcatggagtcgtctggctacactcccctcagcaccacagccaaagtcagg
ccaaagaagttgggcttctctaactttggccacctgaggaagaagagatgtgacgactcg
actgactacatctgccccctggaggcggcccaggcccaggctcagctccaggcggtggtg
aacggggcccaccggccctactccggcttcaggggcctcagcccaatcctggacagagac
ccagacagacgagagcagccctcatcaatgcttcggatcatcatgattggcccattgtat
gcaagatggaggagtgcatgttggaacaggactatcccaccatgcaccttggggggaggg
gctcaaccatctgcagatggcggtgacagaggggaccgtactgcagatagaagctctttc
tga
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