Salvelinus sp. IW2-2015 (Arctic char): 111952126
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Entry
111952126 CDS
T05762
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04623
Cytosolic DNA-sensing pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111952126
04621 NOD-like receptor signaling pathway
111952126
04622 RIG-I-like receptor signaling pathway
111952126
04623 Cytosolic DNA-sensing pathway
111952126
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111952126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952126
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111952126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
111952126
NCBI-ProteinID:
XP_023826405
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All DBs
Position
LG26:complement(30376111..30388456)
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AA seq
416 aa
AA seq
DB search
MQSCKPQFGDWLIEQVRTEQYTGLFFIDNNKFRVPWKHNSRKDCSEDDLKIFREWAVVSG
KINEHRNDKAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPHIEKI
TLENYGIDCALTPTENTPPGMEHDILNFSNLTLNPLXLIQHTENSIPVHTHYPVPPVLVQ
QPYYQVNPDALLNLPATNSSLWDLEITISYRGSEMRKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTYGLPDHKQIEYTNCILGSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSDPREAHP
EPRKMPQNEMVQLLSFQQYKNELIAFKENKRGSPDYTIHMCFGEKFPDGKPLEKKLIVVK
VVPLICRYFHEVAQEEGASSLQNDNISLQISHHNSLMELINATWPDGPQHAMGQYF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctgcaaacctcagttcggtgactggctgatagaacaggtgcggaccgagcaa
tacaccggtttgttctttattgacaacaataagttcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccttaaaatattcagggaatgggcagtggtcagtggg
aaaatcaatgagcatcgcaatgacaaggcwaagtggaagaccaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtctacctggtcatcaatgagtataactatgagagcccgcacatagaaaaaatc
actctggagaactatggcattgactgtgctctcacccctacagaaaacactcccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccccctayacctgatccaa
cacacagagaactctataccggtacacacacactacccagtgccaccagtcctkgtacag
cagccatactaccaagtaaatccggatgccctgctcaacctgcctgccaccaactcatcc
ctctgggacttggagatcaccatctcctatagggggagcgagatgcgaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcacatacgggctgccagaccacaaacagattgaatacaccaactgc
atcctaggaagcgttcaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagcgaccccagagaggcacaccct
gaacccaggaagatgccccaaaatgaaatggtacaactgttgagcttccagcagtacaaa
aatgagctgatagcgtttaaggagaacaagcgaggctctcctgactataccatccacatg
tgctttggcgagaagttccctgacggaaaacccctggagaagaaactcattgtrgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggggcgtcgtcc
cttcagaatgacaacatcagcctgcagatctcccaccacaacagcctgatggagctcatc
aatgccacctggcccgacggcccacagcacgccatggggcagtacttctag
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