Salvelinus sp. IW2-2015 (Arctic char): 111952151
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Entry
111952151 CDS
T05762
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111952151 (mindy4)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111952151 (mindy4)
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
111952151 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
111952151
NCBI-ProteinID:
XP_023826448
LinkDB
All DBs
Position
LG26:3008929..3023593
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AA seq
725 aa
AA seq
DB search
MPQVMVVRVEEVAASLVREFLSRKGLKRTIACMDEEHPRTDGSINNRSDLRQILHLEGLY
KNNKAQDCPLKSMLEIIVRHHIEGHKEDRPVFNSDVIQTVSTTQKLVTKSPILTPTVYDH
SRAEENTTRFIFNKTDMSRSLSEVVCPPHGTLSSFEVSDTPPTTTQRSFWSHSLSSDGQQ
DRQHVPSFLDNDSAAKRESFSDKNTVVTTESTHKNKTSRLRRGMMAGPIASSPQESNRKR
QTRRLGGPNLLLANDENHKNISDGPLLTTVQSQRMVKGLTELSTADPMRESQQPRRSTLG
RGFDQDGYGFERVGKDKHKTSKTKSMTNQNVDVHMSEMILDDIDDDEELRELSRVSCHSS
SLPQTTSDSQPMDQHTAIALKELILGSRTSCFSAEWRSQSFTFSDAPDLRYGLVQKKGGP
CGVLASVQACILQKLLFEGTGSDAGHQRLRPSGAVRTKCLTLATAEILWRAGEGKKATIA
ITSGRNHFTPTGHHRSEGVLEKITCIDVDNLKDLQLLVEQHIQQFESGALGCILLTISAI
LSRSIDRVREDMDVPNTTLIGAHGYCTQELVNLLLCGQAVSNVFNNNMELDSGNGNLTLL
KGIRGRSDIGLLSLFEHYNICKVGSNLKTPKFPIWVVCSESHFSVLFGVQELLSDQCVIG
EFDLYYYDGLANQQEEICLTVFVGTSGKSAGCQGMDTDLIPPLEHCIRTKWKDAIVNWND
TEPIL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagttatggttgtacgagtagaagaagttgctgcatcgcttgtgcgggaattt
ctcagtcggaagggactcaagagaacgattgcctgcatggatgaagagcatcctcgtaca
gatggcagcatcaacaatagatccgatctgcgacaaattcttcatttggaaggtctatat
aaaaacaacaaggcccaagactgtcccctgaaatcaatgttggaaatcattgtaagacat
cacattgaaggacataaagaggacaggccagtcttcaacagtgatgtcatccagaccgta
tcaactacacagaagttggtgacaaagtctccaatattgacaccaacagtgtatgaccac
agcagggcagaagagaacactactagatttattttcaacaaaactgacatgtcaaggtca
ctttcagaggttgtctgtccacctcatggtacattatcatcatttgaagtgtcagatact
cccccaacaactacccagagaagtttctggagccatagcctttcctcagacggccagcag
gaccgacagcatgtaccctccttcctagacaatgacagcgccgctaaaagggaatccttt
tcagacaaaaacacggtcgtcaccacagagagtactcataagaacaaaacaagccgcctc
agacgaggcatgatggcaggtcccatagctagttccccccaggaatcgaatagaaaacgt
cagactcgacggttgggaggccctaatcttcttctggcaaatgatgaaaaccacaaaaac
atcagcgatgggcctctgttgactactgtccagtcacagagaatggttaaagggttgaca
gagctctccactgctgaccccatgagagaaagccaacagccgcggcgcagcacactgggg
agaggatttgatcaagatggctatgggtttgagagagtaggaaaagacaagcacaagacc
agcaaaacaaaatcaatgaccaatcaaaatgttgatgtgcacatgtcggagatgattttg
gatgacattgatgatgatgaggagttgcgtgagctctccagagtgtcctgccactcctcc
agtttgcctcaaaccacttctgatagtcaacccatggaccagcatactgccattgccctg
aaagagctcatccttggctccaggaccagttgtttcagtgccgagtggaggagtcagagc
ttcactttctccgatgcacctgatctgagatatgggcttgttcagaagaagggtggtcct
tgtggagttctggcttcagtccaggcttgtattctgcagaaacttctatttgaggggacc
ggcagcgacgcagggcaccagagattaagaccctctggtgctgtgagaacaaagtgcctc
acgttagccactgctgagatcctgtggagggctggggaggggaaaaaagccaccatcgcc
ataacatcaggaagaaatcatttcacccctacaggacaccatagatctgaaggagtacta
gaaaagattacatgtattgatgttgacaatctaaaggaccttcagttgcttgtggaacag
catattcaacagtttgagtccggagccttagggtgtatattgctcaccatctctgctatt
ctctccagatctattgaccgggttagagaggatatggatgtccccaacaccacactcatt
ggagcccatggctactgcacacaggagctggtcaatttattgctgtgtggacaggctgtg
tccaatgtcttcaacaacaatatggagctggattcaggcaatggaaacctgacccttctc
aagggaataagaggtcgcagtgacattggactgctgtccttatttgaacattataatata
tgcaaggttggctccaacctgaagactcccaagttccctatctgggtggtgtgcagcgag
agccatttcagcgtgctctttggtgtgcaggagctgctgagtgaccagtgtgtgatcggg
gagtttgacctgtactactacgacggcctagccaatcagcaggaggaaatctgcctaact
gtctttgtaggtacctcaggaaaatctgctggctgccaaggtatggacactgatctcatt
cctcctcttgaacactgtatacggaccaaatggaaagatgccattgtcaattggaatgac
accgagcccatactttga
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